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推进鹰嘴豆育种:用于针对性缓解非生物胁迫和遗传改良的组学见解

Advancing Chickpea Breeding: Omics Insights for Targeted Abiotic Stress Mitigation and Genetic Enhancement.

作者信息

Altaf Muhammad Tanveer, Liaqat Waqas, Ali Amjad, Jamil Amna, Fahad Muhammad, Rahman Muhammad Aneeq Ur, Baloch Faheem Shehzad, Mohamed Heba I

机构信息

Department of Field Crops, Faculty of Agriculture, Recep Tayyip Erdoğan University, Rize/Pazar, Türkiye.

Department of Field Crops, Faculty of Agriculture, Institute of Natural and Applied Sciences, Çukurova University, 01330, Adana, Türkiye.

出版信息

Biochem Genet. 2025 Apr;63(2):1063-1115. doi: 10.1007/s10528-024-10954-8. Epub 2024 Nov 12.

Abstract

Chickpea is a major source of proteins and is considered the most economically vital food legume. Chickpea production is threatened by several abiotic and biotic factors worldwide. The main constraints limiting worldwide chickpea production are abiotic conditions such as drought, heat, salinity, and cold. It is clear that chickpea is treasured for its nutritive value, in particular its high protein content, and hence study of problems like drought, cold and salinity stresses are very important concerning chickpeas. In this regard, several physiological, biochemical, and molecular mechanisms are reviewed to confer tolerance to abiotic stress. The most crippling economic losses in agriculture occur due to these abiotic stressors, which affect plants in many ways. All these abiotic stresses affect the water relations of the plant, both at the cellular level as well as the whole-plant level, causing both specific and non-specific reactions, damage and adaptation reactions. These stresses share common features. Breeding programs use a huge collection of over 100,000 chickpea accessions as their foundation. Significant advancements in conventional breeding, including mutagenesis, gene/allele introgression, and germplasm introduction, have been made through this method. Abiotic tolerance and yield component selection are made easier by creating unique DNA markers for the genus Cicer, which has been made possible by developments in high-throughput sequencing and molecular biology. Transcriptomics, proteomics, and metabolomics have also made it possible to identify particular genes, proteins, and metabolites linked to chickpea tolerance to abiotic stress. Chickpea abiotic stress tolerance has been directly and potentially improved by biotechnological applications, which are covered by all 'Omics' approaches. It requires information on the abiotic stress response at the different molecular levels, which comprises gene expression analysis for metabolites or proteins and its impact on phenotype. Studies on chickpea genome-wide expression profiling have been conducted to determine important candidate genes and their regulatory networks for abiotic stress response. This study aimed to offer a detailed overview of the diverse 'Omics' approaches for resilience's to abiotic stresses on chickpea plants.

摘要

鹰嘴豆是蛋白质的主要来源,被认为是经济上最重要的食用豆类。全球鹰嘴豆生产受到多种非生物和生物因素的威胁。限制全球鹰嘴豆生产的主要制约因素是非生物条件,如干旱、高温、盐碱化和寒冷。显然,鹰嘴豆因其营养价值,特别是其高蛋白含量而受到重视,因此研究干旱、寒冷和盐碱胁迫等问题对于鹰嘴豆来说非常重要。在这方面,综述了几种生理、生化和分子机制以赋予对非生物胁迫的耐受性。农业中最严重的经济损失是由这些非生物胁迫因素造成的,它们以多种方式影响植物。所有这些非生物胁迫都会影响植物的水分关系,无论是在细胞水平还是在整株植物水平,都会引起特定和非特定的反应、损伤和适应反应。这些胁迫具有共同特征。育种计划以超过100,000份鹰嘴豆种质的大量收集为基础。通过这种方法,在常规育种方面取得了重大进展,包括诱变、基因/等位基因渗入和种质引入。通过为鹰嘴豆属创建独特的DNA标记,使非生物耐受性和产量成分选择变得更加容易,这得益于高通量测序和分子生物学的发展。转录组学、蛋白质组学和代谢组学也使得识别与鹰嘴豆对非生物胁迫耐受性相关的特定基因、蛋白质和代谢物成为可能。生物技术应用直接并潜在地提高了鹰嘴豆对非生物胁迫的耐受性,所有“组学”方法都涵盖了这些应用。这需要不同分子水平上非生物胁迫反应的信息,包括对代谢物或蛋白质的基因表达分析及其对表型的影响。已经开展了关于鹰嘴豆全基因组表达谱分析的研究,以确定非生物胁迫反应的重要候选基因及其调控网络。本研究旨在详细概述用于鹰嘴豆植物抗非生物胁迫的各种“组学”方法。

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