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利用网络理论评估海洋种群的空间结构:以大西洋海扇(Placopecten magellanicus)连通性为例。

Assessing spatial structure in marine populations using network theory: A case study of Atlantic sea scallop (Placopecten magellanicus) connectivity.

机构信息

Department of Engineering Mathematics and Internetworking, Dalhousie University, Halifax, Nova Scotia, Canada.

Fisheries and Oceans Canada, Bedford Institute of Oceanography, Dartmouth, Nova Scotia, Canada.

出版信息

PLoS One. 2024 Nov 13;19(11):e0308787. doi: 10.1371/journal.pone.0308787. eCollection 2024.

Abstract

Knowledge of the geographic distribution and connectivity of marine populations is essential for ecological understanding and informing management. Previous works have assessed spatial structure by quantifying exchange using Lagrangian particle-tracking simulations, but their scope of analysis is limited by their use of predefined subpopulations. To instead delineate subpopulations emerging naturally from marine population connectivity, we interpret this connectivity as a network, enabling the use of powerful analytic tools from the field of network theory. The modelling approach presented here uses particle-tracking to construct a transport network, and then applies the community detection algorithm Infomap to identify subpopulations that exhibit high internal connectivity and sparse connectivity with other subpopulations. An established quality metric, the coherence ratio, and a new metric we introduce indicating self-recruitment to subpopulations, dubbed the fortress ratio, are used to interpret community-level exchange. We use the Atlantic sea scallop (Placopecten magellanicus) in the northwest Atlantic as a case study. Results suggest that genetic lineages of P. magellanicus demonstrate spatial substructure that depends on horizontal transport, vertical motility, and suitable habitat. Our results support connectivity previously characterized on Georges Bank and Mid-Atlantic Bight. The Gulf of St. Lawrence genetic lineage is found to consist of five subpopulations that are classified as being a sink, source, permeable, or impermeable using quality metrics. This approach may be applied to other planktonic dispersers and prove useful to management.

摘要

了解海洋种群的地理分布和连通性对于生态理解和管理决策至关重要。先前的研究通过使用拉格朗日粒子追踪模拟来量化交换来评估空间结构,但它们的分析范围受到使用预定义亚种群的限制。为了从海洋种群连通性中自然划分亚种群,我们将这种连通性解释为一个网络,从而能够使用网络理论领域的强大分析工具。这里提出的建模方法使用粒子追踪来构建一个传输网络,然后应用 Infomap 社区检测算法来识别具有高内部连通性和与其他亚种群稀疏连通性的亚种群。我们使用了一个已建立的质量指标,即相干比,以及我们引入的一个新指标,即指示亚种群自我招募的堡垒比,来解释社区层面的交换。我们以北大西洋扇贝(Placopecten magellanicus)为例进行了研究。结果表明,P. magellanicus 的遗传谱系表现出依赖于水平传输、垂直运动性和适宜栖息地的空间亚结构。我们的结果支持先前在乔治浅滩和中大西洋湾描述的连通性。圣劳伦斯湾的遗传谱系被发现由五个亚种群组成,使用质量指标可以将其归类为汇、源、可渗透或不可渗透。这种方法可应用于其他浮游生物扩散者,并对管理具有重要意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa18/11559974/3c964520022f/pone.0308787.g001.jpg

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