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研究人员对国立癌症研究所癌症研究数据共享中心的使用情况:文献的范围综述。

Usage of the National Cancer Institute Cancer Research Data Commons by Researchers: A Scoping Review of the Literature.

机构信息

Informatics and Data Science Program, Center for Biomedical Informatics and Information Technology, National Cancer Institute, Rockville, MD.

Office of Data Science and Strategy, National Institutes of Health, Bethesda, MD.

出版信息

JCO Clin Cancer Inform. 2024 Nov;8:e2400116. doi: 10.1200/CCI.24.00116. Epub 2024 Nov 13.

Abstract

PURPOSE

Over the past decade, significant surges in cancer data of all types have happened. To promote sharing and use of these rich data, the National Cancer Institute's Cancer Research Data Commons (CRDC) was developed as a cloud-based infrastructure that provides a large, comprehensive, and expanding collection of cancer data with tools for analysis. We conducted this scoping review of articles to provide an overview of how CRDC resources are being used by cancer researchers.

METHODS

A thorough literature search was conducted to identify all relevant publications. We included publications that directly cited CRDC resources to specifically examine the impact and contributions of CRDC by itself. We summarized the distributions and trends of how CRDC components were used by the research community and discussed current research gaps and future opportunities.

RESULTS

In terms of CRDC resources used by the research community, encouraging trends in utilization were observed, suggesting that CRDC has become an important building block for fostering a wide range of cancer research. We also noted a few areas where current applications are rather lacking and provided insights on how improvements can be made by CRDC and research community.

CONCLUSION

CRDC, as the foundation of a National Cancer Data Ecosystem, will continue empowering the research community to effectively leverage cancer-related data, uncover novel strategies, and address the needs of patients with cancer, ultimately combatting this disease more effectively.

摘要

目的

在过去的十年中,各种类型的癌症数据都出现了显著的增长。为了促进这些丰富数据的共享和使用,美国国家癌症研究所的癌症研究数据共享中心(CRDC)被开发为一个基于云的基础设施,提供了一个大型、综合和不断扩展的癌症数据集合,以及用于分析的工具。我们进行了这项范围界定综述,以概述癌症研究人员如何使用 CRDC 资源。

方法

进行了全面的文献检索,以确定所有相关出版物。我们纳入了直接引用 CRDC 资源的出版物,专门考察 CRDC 本身的影响和贡献。我们总结了研究社区使用 CRDC 各个组成部分的分布和趋势,并讨论了当前的研究差距和未来的机会。

结果

就研究社区使用的 CRDC 资源而言,观察到了利用方面令人鼓舞的趋势,表明 CRDC 已成为促进广泛癌症研究的重要基石。我们还注意到了当前应用相对缺乏的几个领域,并就如何通过 CRDC 和研究社区进行改进提供了见解。

结论

作为国家癌症数据生态系统的基础,CRDC 将继续为研究社区提供支持,以有效地利用与癌症相关的数据,发现新的策略,并满足癌症患者的需求,最终更有效地对抗这种疾病。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59b1/11575903/d11c277e1dd5/cci-8-e2400116-g001.jpg

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