Ma Ran, Liu Zubi, Zhang Li, Chen Cailing, Yuan Bo, Luo Yanfeng, Marcos Pedro J, Tattevin Pierre, Zhang Wei
Pediatrics Department, The First Affiliated Hospital of Shihezi University, Shihezi, China.
Key Laboratory of Digital Technology in Medical Diagnostics of Zhejiang Province, Dian Diagnostics Group Co., Ltd., Hangzhou, China.
J Thorac Dis. 2024 Oct 31;16(10):6969-6982. doi: 10.21037/jtd-24-1417. Epub 2024 Oct 30.
Severe community-acquired pneumonia (SCAP) in children is associated with high morbidity and mortality, and the data of epidemiological characteristics of SCAP in Shihezi area were inadequate. The main pathogens responsible for SCAP may vary dramatically according to the geographical area. We identified two tertiary hospitals with better medical level and the largest number of hospitalized children in Shihezi as sentinel hospitals. The primary purpose of the study is to cross-sectionally summarize the epidemiological characteristics of SCAP in children admitted to hospitals in Shihezi, Xinjiang, China in 2023.
SCAP was defined as involving the respiratory and other systems, accompanied by significant systemic toxic symptoms. We prospectively included all patients <15 years old who diagnosed with SCAP according to the SCAP diagnostic criteria. We enrolled all patients <15 years who were diagnosed with SCAP during the study period (January to December 2023), a total of 309 cases were included from two sentinel hospitals in Shihezi, Xinjiang, from January to December 2023. Basic information and clinical data were collected on a standardized questionnaire, and respiratory samples were obtained for the detection of 27 respiratory pathogens using a panel, targeted next-generation sequencing (t-NGS), and metagenomic next-generation sequencing (mNGS).
We enrolled 309 patients aged 1-14 years: 157 males (50.8%) and 152 females (49.2%). There were 45 infants (1 month to 1 year, 14.6%), 33 toddlers (>1-3 years, 10.7%), 121 preschool children (>3-7 years, 39.2%), and 110 school-age children (>7-14 years, 35.6%). Overall, the number of SCAP cases in spring was 39 (12.6%), in summer was 44 (14.2%), in autumn was 137 (44.3%), and in winter was 89 (28.8%). A total of 572 pathogens were detected in this study, primarily (MP) (n=120, 21.0%), respiratory syncytial virus (RSV) (n=82 strains, 14.3%), and (SP) (n=67, 11.7%). MP was prevalent mainly during the cold season of autumn, with its detection starting from July and reaching a peak detection rate in November. By studying the interaction among 22 common respiratory pathogens, we found a strong negative correlation between MP and SP, yet the highest number of co-infected cases involved MP and SP. Seventy-six (63.3% of all MP) SCAP were identified as macrolide-resistant (all with mutations at the A2063G site). MP SCAP was associated with prolonged illness duration and fever spikes. We observed incidence of pediatric SCAP showed an inverse trend with PM2.5 level changes.
The most common pathogens responsible for SCAP in the Shihezi region in 2023 were MP, RSV, and SP. MP was the primary cause of SCAP in children, and increased risk of co-infections, and high prevalence of macrolides resistance-all related to mutations at the A2063G site. Early identification of SCAP pathogen epidemiological characteristics can reduce severe case occurrence.
儿童重症社区获得性肺炎(SCAP)的发病率和死亡率较高,而石河子地区SCAP的流行病学特征数据不足。SCAP的主要病原体可能因地理区域而异。我们将石河子两所医疗水平较高且住院儿童数量最多的三级医院确定为哨点医院。本研究的主要目的是横断面总结2023年在中国新疆石河子住院的儿童SCAP的流行病学特征。
SCAP被定义为累及呼吸及其他系统,并伴有明显的全身中毒症状。我们前瞻性纳入了所有根据SCAP诊断标准诊断为SCAP的15岁以下患者。我们纳入了研究期间(2023年1月至12月)所有诊断为SCAP的15岁以下患者,2023年1月至12月共从新疆石河子的两所哨点医院纳入309例病例。通过标准化问卷收集基本信息和临床数据,并采集呼吸道样本,使用检测板、靶向二代测序(t-NGS)和宏基因组二代测序(mNGS)检测27种呼吸道病原体。
我们纳入了309例1至14岁的患者:男性157例(50.8%),女性152例(49.2%)。有45例婴儿(1个月至1岁,14.6%),33例幼儿(>1至3岁,10.7%),121例学龄前儿童(>3至7岁,39.2%),110例学龄儿童(>7至14岁,35.6%)。总体而言春季SCAP病例数为39例(12.6%),夏季为44例(14.2%),秋季为137例(44.3%),冬季为89例(28.8%)。本研究共检测到572种病原体,主要为肺炎支原体(MP)(n = 120,21.0%)、呼吸道合胞病毒(RSV)(n = 82株,14.3%)和肺炎链球菌(SP)(n = 67,11.7%)。MP主要在秋季寒冷季节流行,7月开始检测到,11月检测率达到峰值。通过研究22种常见呼吸道病原体之间的相互作用,我们发现MP与SP之间存在很强的负相关性,但共感染病例数最多涉及MP和SP。76例(所有MP的63.3%)SCAP被鉴定为大环内酯耐药(均在A2063G位点发生突变)。MP SCAP与病程延长和高热有关。我们观察到儿童SCAP发病率与PM2.5水平变化呈相反趋势。
2023年石河子地区SCAP最常见的病原体是MP、RSV和SP。MP是儿童SCAP的主要病因,且合并感染风险增加,大环内酯耐药率高——均与A2063G位点突变有关。早期识别SCAP病原体流行病学特征可减少重症病例的发生。