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临床全外显子组测序揭示了该基因中导致常染色体隐性遗传性脊髓小脑共济失调的新型纯合错义变异。

Clinical whole Exome Sequencing Reveals Novel Homozygous Missense Variant in the Gene causing Autosomal Recessive Spinocerebellar Ataxia.

作者信息

Bagabir Hala Abubaker, Abdulkareem Angham Abdulrhman, Muthaffar Osama Yousef, Shirah Bader H, Naseer Muhammad Imran

机构信息

Hala Abubaker Bagabir Physiology Department, Faculty of Medicine in Rabigh, King Abdulaziz University, Jeddah, Saudi Arabia.

Angham Abdulrhman Abdulkareem Center of Excellence in Genomic Medicine Research, Faculty of Science, Department of Biochemistry, King Abdulaziz University, Jeddah, Saudi Arabia.

出版信息

Pak J Med Sci. 2024 Nov;40(10):2243-2250. doi: 10.12669/pjms.40.10.10474.

DOI:10.12669/pjms.40.10.10474
PMID:39554679
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11568725/
Abstract

BACKGROUND & OBJECTIVE: Autosomal recessive cerebellar ataxias (ARCA) are rare heterogenous neurodegenerative disorders characterized by degeneration of the cerebellum and spinal cord with an early onset before the age of 20 years. PMPCA (MIM: 613036), is a key enzyme in mitochondrial protein processing which is critical for cell survival and growth. Our objective was to investigate Peptidase, Mitochondrial Processing Subunit Alpha (PMPCA) mutations linked with Spinocerebellar ataxia, autosomal recessive 2 (SCAR2).

METHOD

In the current study, Whole Exome Sequencing (WES) was done followed by Sanger sequencing for the validation of the WES results.

RESULTS

WES results identified a novel homozygous variant, NM_015160.2: c.802C>T p.(Arg268Trp) in gene. Mutation in this gene leads to progressive cerebellar ataxia with fine motor skills difficulties, intentional tremors, slow slurred speech and learning difficulties in a 12-year-old Saudi patient. WES results were further validated by Sanger sequencing technique.

CONCLUSIONS

Identified phenotype in our case was similar as previously described for SCAR2 related conditions. To our knowledge, this is the first reported mutation in gene leading to SCAR2 in Saudi Arabia. These findings will enrich the scarce literature, further provide a new insight on the role of gene-related disorders leading to SCAR2 and expand the disease concept. In addition, this will help to establish a database for the disease and its causative factors will further help in controlling diseases resulting from consanguinity in Saudi population.

摘要

背景与目的

常染色体隐性遗传性小脑共济失调(ARCA)是一种罕见的异质性神经退行性疾病,其特征为小脑和脊髓变性,发病早于20岁。PMPCA(MIM: 613036)是线粒体蛋白加工中的关键酶,对细胞存活和生长至关重要。我们的目的是研究与常染色体隐性遗传性脊髓小脑共济失调2型(SCAR2)相关的线粒体加工肽酶亚基α(PMPCA)突变。

方法

在本研究中,先进行了全外显子组测序(WES),随后进行桑格测序以验证WES结果。

结果

WES结果在该基因中鉴定出一个新的纯合变异,NM_015160.2: c.802C>T p.(Arg268Trp)。该基因的突变导致一名12岁沙特患者出现进行性小脑共济失调,并伴有精细运动技能困难、意向性震颤、缓慢含糊的言语和学习困难。WES结果通过桑格测序技术进一步得到验证。

结论

我们病例中所确定的表型与先前描述的与SCAR2相关的病症相似。据我们所知,这是沙特阿拉伯首次报道的该基因导致SCAR2的突变。这些发现将丰富稀缺的文献资料,进一步为导致SCAR2的该基因相关疾病的作用提供新的见解,并扩展疾病概念。此外,这将有助于建立该疾病的数据库,其致病因素将进一步有助于控制沙特人群中因近亲结婚导致的疾病。

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本文引用的文献

1
Autosomal recessive cerebellar ataxias: a diagnostic classification approach according to ocular features.常染色体隐性遗传性小脑性共济失调:基于眼部特征的诊断分类方法
Front Integr Neurosci. 2024 Feb 7;17:1275794. doi: 10.3389/fnint.2023.1275794. eCollection 2023.
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Mutations, Genes, and Phenotypes Related to Movement Disorders and Ataxias.与运动障碍和共济失调相关的突变、基因和表型。
Int J Mol Sci. 2022 Oct 6;23(19):11847. doi: 10.3390/ijms231911847.
3
Treatment and Management of Autosomal Recessive Cerebellar Ataxias: Current Advances and Future Perspectives.
常染色体隐性小脑共济失调的治疗和管理:当前进展和未来展望。
CNS Neurol Disord Drug Targets. 2023;22(5):678-697. doi: 10.2174/1871527321666220418114846.
4
Whole Exome Sequencing Identifies Three Novel Mutations in the Gene From Saudi Families Leading to Primary Microcephaly.全外显子组测序在沙特家庭中鉴定出导致原发性小头畸形的该基因的三个新突变。
Front Pediatr. 2021 Feb 11;8:627122. doi: 10.3389/fped.2020.627122. eCollection 2020.
5
Autosomal recessive cerebellar ataxia with spasticity due to a rare mutation in gene in a large consanguineous Saudi family.沙特一个大家族中因一个基因的罕见突变导致的伴有痉挛的常染色体隐性小脑共济失调。
Genes Dis. 2019 Jul 27;8(1):110-114. doi: 10.1016/j.gendis.2019.07.009. eCollection 2021 Jan.
6
A severe form of autosomal recessive spinocerebellar ataxia associated with novel PMPCA variants.一种与新型 PMPCA 变异相关的严重常染色体隐性脊髓小脑共济失调形式。
Brain Dev. 2021 Mar;43(3):464-469. doi: 10.1016/j.braindev.2020.11.008. Epub 2020 Dec 1.
7
A Novel Variant in CWF19L1 Gene in a Family with Late-Onset Autosomal Recessive Cerebellar Ataxia 17.一个家族性迟发性常染色体隐性小脑共济失调 17 中 CWF19L1 基因的新型变异。
Neurol Res. 2021 Feb;43(2):141-147. doi: 10.1080/01616412.2020.1831331. Epub 2020 Oct 4.
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A novel mutation in gene in a Saudi female with ataxia telangiectasia.一名患有共济失调毛细血管扩张症的沙特女性基因中的一种新型突变。
Int J Neurosci. 2021 Feb;131(2):206-211. doi: 10.1080/00207454.2020.1736582. Epub 2020 Mar 16.
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Front Genet. 2020 Feb 21;11:14. doi: 10.3389/fgene.2020.00014. eCollection 2020.
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