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全外显子组测序在沙特家庭中鉴定出导致原发性小头畸形的该基因的三个新突变。

Whole Exome Sequencing Identifies Three Novel Mutations in the Gene From Saudi Families Leading to Primary Microcephaly.

作者信息

Naseer Muhammad Imran, Abdulkareem Angham Abdulrahman, Muthaffar Osama Yousef, Sogaty Sameera, Alkhatabi Hiba, Almaghrabi Sarah, Chaudhary Adeel G

机构信息

Center of Excellence in Genomic Medicine Research, King Abdulaziz University, Jeddah, Saudi Arabia.

Department of Medical Laboratory Technology, Faculty of Applied Medical Sciences, King Abdulaziz University, Jeddah, Saudi Arabia.

出版信息

Front Pediatr. 2021 Feb 11;8:627122. doi: 10.3389/fped.2020.627122. eCollection 2020.

DOI:10.3389/fped.2020.627122
PMID:33643967
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7904689/
Abstract

Autosomal recessive primary microcephaly (MCPH) is a neurodevelopmental defect that is characterized by reduced head circumference at birth along with non-progressive intellectual disability. Till date, 25 genes related to MCPH have been reported so far in humans. The (abnormal spindle-like, microcephaly-associated) gene is among the most frequently mutated MCPH gene. We studied three different families having primary microcephaly from different regions of Saudi Arabia. Whole exome sequencing (WES) and Sanger sequencing were done to identify the genetic defect. Collectively, three novel variants were identified in the gene from three different primary microcephaly families. Family 1, showed a deletion mutation leading to a frameshift mutation c.1003del. (p.Val335) in exon 3 of the gene and family 2, also showed deletion mutation leading to frameshift mutation c.1047del (p.Gln349Hisfs18), while in family 3, we identified a missense mutation c.5623A>G leading to a change in protein (p.Lys1875Glu) in exon 18 of the gene underlying the disorder. The identified respective mutations were ruled out in 100 healthy control samples. In conclusion, we found three novel mutations in the gene in Saudi families that will help to establish a disease database for specified mutations in Saudi population and will further help to identify strategies to tackle primary microcephaly in the kingdom.

摘要

常染色体隐性原发性小头畸形(MCPH)是一种神经发育缺陷,其特征是出生时头围减小以及非进行性智力残疾。迄今为止,人类中已报道了25个与MCPH相关的基因。(异常纺锤样,小头畸形相关)基因是最常发生突变的MCPH基因之一。我们研究了来自沙特阿拉伯不同地区的三个患有原发性小头畸形的不同家庭。进行了全外显子组测序(WES)和桑格测序以确定遗传缺陷。总体而言,在来自三个不同原发性小头畸形家庭的该基因中鉴定出三个新变体。家庭1在该基因的外显子3中显示出缺失突变,导致移码突变c.1003del(p.Val335),家庭2也显示出缺失突变,导致移码突变c.1047del(p.Gln349Hisfs18),而在家庭3中,我们在该疾病相关基因的外显子18中鉴定出一个错义突变c.5623A>G,导致蛋白质变化(p.Lys1875Glu)。在100个健康对照样本中排除了所鉴定的相应突变。总之,我们在沙特家庭的该基因中发现了三个新突变,这将有助于建立沙特人群特定突变的疾病数据库,并将进一步有助于确定在该国应对原发性小头畸形的策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/77d7/7904689/b357747f62ef/fped-08-627122-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/77d7/7904689/23228ab7c20b/fped-08-627122-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/77d7/7904689/760568a5400b/fped-08-627122-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/77d7/7904689/f33b7c416be9/fped-08-627122-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/77d7/7904689/b357747f62ef/fped-08-627122-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/77d7/7904689/23228ab7c20b/fped-08-627122-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/77d7/7904689/760568a5400b/fped-08-627122-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/77d7/7904689/f33b7c416be9/fped-08-627122-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/77d7/7904689/b357747f62ef/fped-08-627122-g0004.jpg

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