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垂体全转录组分析揭示了调控海兰褐蛋鸡繁殖的关键基因,并构建了它们的 ceRNA 分子调控网络。

Pituitary whole transcriptome analysis reveals key genes regulating reproduction in Hy-Line Brown hens and the construction of their ceRNA molecular regulatory network.

机构信息

College of Animal Science and Technology, Henan Agricultural University, Zhengzhou, 45004, China.

College of Animal Science and Veterinary Medicine, Henan Institute of Science and Technology, Xinxiang, 453003, China.

出版信息

BMC Genomics. 2024 Nov 18;25(1):1100. doi: 10.1186/s12864-024-11035-1.

DOI:10.1186/s12864-024-11035-1
PMID:39558278
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11575065/
Abstract

BACKGROUND

The development and egg-laying performance of hens are precisely regulated by hormones secreted by the pituitary. In this study, we performed comprehensive transcriptome sequencing of pituitary from Hy-Line Brown hens at 15, 20, 30 and 68 W of age. Through association analysis, we identified key genes and ceRNA regulatory networks related to pituitary development and egg production.

RESULTS

Based on the comprehensive transcriptome data, we identified 470 differentially expressed lncRNAs (DE-lncRNAs), 38 differentially expressed miRNAs (DE-miRNAs), and 2,449 differentially expressed mRNAs (DE-mRNAs). Time-series analysis pinpointed genes and signaling pathways that significantly influence pituitary hormone secretion at various stages. At 15 W, the high expression of GHRHR, NPY1R, and TSHR in the pituitary supports growth. At 20 and 30 W, elevated GNRHR expression sustains continuous egg production. In the late laying period, the expression of PRL may lead to a decline in egg production. Additionally, association analysis enabled the construction of a ceRNA regulatory network involving non-coding RNAs that regulate the development and reproduction of hens.

CONCLUSION

This study elucidated the comprehensive transcriptome expression profiles of the pituitary gland during the development and egg-laying processes in Hy-Line Brown hens and constructed the associated molecular regulatory networks. These findings lay the foundation for investigating the mechanisms by which non-coding RNAs regulate pituitary hormone secretion.

摘要

背景

母鸡的发育和产蛋性能是由垂体分泌的激素精确调控的。本研究对 15、20、30 和 68 周龄海兰褐蛋鸡的垂体进行了全面的转录组测序。通过关联分析,我们鉴定了与垂体发育和产蛋相关的关键基因和 ceRNA 调控网络。

结果

基于全面的转录组数据,我们鉴定出 470 个差异表达的长非编码 RNA(DE-lncRNA)、38 个差异表达的 microRNA(DE-miRNA)和 2449 个差异表达的 mRNA(DE-mRNA)。时间序列分析确定了在不同阶段显著影响垂体激素分泌的基因和信号通路。在 15 周龄时,垂体中 GHRHR、NPY1R 和 TSHR 的高表达支持生长。在 20 和 30 周龄时,GNRHR 的高表达维持了持续的产蛋。在产蛋后期,PRL 的表达可能导致产蛋量下降。此外,关联分析构建了一个 ceRNA 调控网络,涉及调节母鸡发育和繁殖的非编码 RNA。

结论

本研究阐明了海兰褐蛋鸡发育和产蛋过程中垂体的全面转录组表达谱,并构建了相关的分子调控网络。这些发现为研究非编码 RNA 调节垂体激素分泌的机制奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e33/11575065/fb756e8a7d72/12864_2024_11035_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e33/11575065/6d06566d19f2/12864_2024_11035_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e33/11575065/d26d387778c3/12864_2024_11035_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e33/11575065/480614580b60/12864_2024_11035_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e33/11575065/ccde86649033/12864_2024_11035_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e33/11575065/fb756e8a7d72/12864_2024_11035_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e33/11575065/6d06566d19f2/12864_2024_11035_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e33/11575065/d26d387778c3/12864_2024_11035_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e33/11575065/480614580b60/12864_2024_11035_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e33/11575065/ccde86649033/12864_2024_11035_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e33/11575065/fb756e8a7d72/12864_2024_11035_Fig5_HTML.jpg

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