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恒河魾的全线粒体基因组测序与系统发育分析

Whole mitochondrial genome sequencing and phylogenetic analysis of Gangetic mystus ().

作者信息

Roy Suvra, Parida Pranaya Kumar, Kumar Ramya, Kumar Vikash, Bhakta Dibakar, Behera Bijay Kumar, Das Basanta Kumar

机构信息

Aquatic Environmental Biotechnology (AEB) Division, ICAR-CIFRI, Barrackpore, India.

ICAR-Central Inland Fisheries Research Institute (CIFRI), Barrackpore, India.

出版信息

Mitochondrial DNA B Resour. 2024 Nov 15;9(11):1539-1543. doi: 10.1080/23802359.2024.2427106. eCollection 2024.

Abstract

, known as Gangetic mystus, is a freshwater indigenous catfish. The present study represents the first-ever complete mitochondrial genome sequencing of . The whole mitochondrial genome size is 16,554 bp (GenBank accession number OR018997). The mitogenome organization consists of total 37 genes, with 13 protein-coding genes, two rRNA, 22 tRNAs, and a D-loop regulatory region. Among these, 28 genes are coded on the heavy strand, while eight tRNA genes and ND6 are encoded separately. Phylogenetic analysis reveals that clusters with other species and bagrid catfishes. This work contributes valuable insights into structural characterization and phylogenetic relationships.

摘要

恒河密须鲶,是一种淡水本地鲶鱼。本研究首次对恒河密须鲶进行了完整的线粒体基因组测序。线粒体基因组全长16554bp(GenBank登录号OR018997)。线粒体基因组由37个基因组成,包括13个蛋白质编码基因、2个rRNA、22个tRNA和一个D环调控区。其中,28个基因由重链编码,8个tRNA基因和ND6基因分别编码。系统发育分析表明,恒河密须鲶与其他密须鲶属物种和鲿科鲶鱼聚类在一起。这项工作为结构特征和系统发育关系提供了有价值的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3162/11571728/9d26c5c878d6/TMDN_A_2427106_F0001_C.jpg

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