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全基因组测序以鉴定东亚路易体痴呆患者中的罕见变异。

Whole-genome sequencing to identify rare variants in East Asian patients with dementia with Lewy bodies.

作者信息

Kimura Tetsuaki, Fujita Kosuke, Sakurai Takashi, Niida Shumpei, Ozaki Kouichi, Shigemizu Daichi

机构信息

Medical Genome Center, Research Institute, National Center for Geriatrics and Gerontology, Obu, Aichi, Japan.

Department of Prevention and Care Science, Research Institute, National Center for Geriatrics and Gerontology, Obu, Aichi, Japan.

出版信息

NPJ Aging. 2024 Nov 21;10(1):52. doi: 10.1038/s41514-024-00180-2.

Abstract

Dementia with Lewy bodies (DLB) is the second most common form of age-related dementia, following Alzheimer's disease (AD). DLB is associated with a worse prognosis than AD and is characterized by a more rapid progression of cognitive impairment and a poorer quality of life. In addition, the pathogenesis of DLB is less understood than that of AD, and only three genes-SNCA (α-synuclein), APOE (apolipoprotein E), and GBA1 (glucosylceramidase beta 1)-have been convincingly demonstrated to be associated with DLB. In this study, we utilized whole-genome sequencing data from 1744 Japanese individuals, comprising 45 DLB patients and 1699 cognitively normal older adults, aiming to identify new genes associated with DLB. Our genome-wide association studies of genes with potentially deleterious mutations identified the CDH23 gene as being associated with DLB, reaching a Bonferroni-corrected significance (P = 7.43 × 10). The gene contained three ethnicity-specific heterozygous missense variants (rs181275139, rs563688802, and rs137937502). CDH23 has been linked to deafness syndromes, and DLB patients carrying these mutations displayed symptoms of subjective hearing loss, suggesting a potential association between DLB onset and auditory impairment. Additionally, we explored human leukocyte antigen (HLA) genotypes associated with DLB but found no significant associations. This result suggests that the pathology of DLB differs from that of Parkinson's disease, which has been reported to have an association with HLA. Although a limitation of this study is the lack of replication of our findings, which require further validation in independent cohorts, our study enhances the understanding of the etiology of DLB in the Japanese population and provides new insights into the underlying mechanisms of its pathogenesis.

摘要

路易体痴呆(DLB)是继阿尔茨海默病(AD)之后第二常见的与年龄相关的痴呆形式。与AD相比,DLB的预后更差,其特征是认知障碍进展更快,生活质量更差。此外,与AD相比,DLB的发病机制了解较少,只有三个基因——SNCA(α-突触核蛋白)、APOE(载脂蛋白E)和GBA1(β-葡萄糖神经酰胺酶1)——已被令人信服地证明与DLB相关。在本研究中,我们利用了1744名日本个体的全基因组测序数据,其中包括45名DLB患者和1699名认知正常的老年人,旨在识别与DLB相关的新基因。我们对具有潜在有害突变的基因进行全基因组关联研究,确定CDH23基因与DLB相关,达到了经Bonferroni校正的显著性水平(P = 7.43×10)。该基因包含三个种族特异性杂合错义变体(rs181275139、rs563688802和rs137937502)。CDH23与耳聋综合征有关,携带这些突变的DLB患者表现出主观听力丧失症状,提示DLB发病与听觉障碍之间可能存在关联。此外,我们探索了与DLB相关的人类白细胞抗原(HLA)基因型,但未发现显著关联。这一结果表明,DLB的病理与帕金森病不同,帕金森病已被报道与HLA有关。尽管本研究的一个局限性是缺乏对我们研究结果的重复验证,这需要在独立队列中进一步验证,但我们的研究增进了对日本人群中DLB病因的理解,并为其发病机制的潜在机制提供了新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a2f/11582613/36e8e2c523cc/41514_2024_180_Fig1_HTML.jpg

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