Rajan Deepa H, Marshall Wallace F
bioRxiv. 2024 Nov 19:2024.11.05.622147. doi: 10.1101/2024.11.05.622147.
The single-celled ciliate coeruleus demonstrates habituation to mechanical stimuli, showing that even single cells can manifest a basic form of learning. Although the ability of to habituate has been extensively documented, the mechanism of learning is currently not known. Here we take a bottom-up approach and investigate a simple biochemistry-based model based on prior electrophysiological measurements in along with general properties of receptor molecules. In this model, a mechanoreceptor senses the stimulus and leads to channel opening to change membrane potential, with a sufficient change in polarization triggering an action potential that drives contraction. Receptors that are activated can become internalized, after which they can either be degraded or recycled back to the cell surface. This activity-dependent internalization provides a potential means for the cell to learn. Stochastic simulations of this model confirm that it is capable of showing habituation similar to what is seen in actual cells, including the lack of dishabituation by strong stimuli and the apparently step-like response of individual cells during habituation. The model also can account for several habituation hallmarks that a previous two-state Markov model could not, namely, the dependence of habituation rate on stimulus magnitude, which had to be added onto the two state model but arises naturally in the receptor inactivation model; the rate of response recovery after cessation of stimulation; the ability of high frequency stimulus sequences to drive faster habituation that results in a lower response probability, and the potentiation of habituation by repeated rounds of training and recovery. The model makes the prediction that application of high force stimuli that do not normally habituate should drive habituation to weaker stimuli due to decrease in the receptor number, which serves as an internal hidden variable. We confirmed this prediction using two new sets of experiments involving alternation of weak and strong stimuli. Furthermore, the model predicts that training with high force stimuli delays response recovery to low force stimuli, which aligns with our new experimental data. The model also predicts subliminal accumulation, wherein continuation of training even after habituation has reached asymptotic levels should lead to delayed response recovery, which was also confirmed by new experiments. The model is unable to account for the phenomenon of rate sensitivity, in which habituation caused by higher frequency stimuli is more easily reversed leading to a frequency dependence of response recovery. Such rate sensitivity has not been reported in . Here we carried out a new set of experiments which are consistent with the model's prediction of the lack of rate sensitivity. This work demonstrates how a simple model can suggest new ways to probe single-cell learning at an experimental level. Finally, we interpret the model in terms of a kernel estimator that the cell may use to guide its decisions about how to response to new stimuli as they arise based on information, or the lack thereof, from past stimuli.
单细胞纤毛虫蓝氏贾第鞭毛虫表现出对机械刺激的习惯化,表明即使是单细胞也能表现出一种基本的学习形式。尽管蓝氏贾第鞭毛虫的习惯化能力已有大量文献记载,但其学习机制目前尚不清楚。在这里,我们采用自下而上的方法,基于先前在蓝氏贾第鞭毛虫中的电生理测量以及受体分子的一般特性,研究一个基于简单生物化学的模型。在这个模型中,一个机械感受器感知刺激并导致通道开放以改变膜电位,极化的充分变化触发驱动收缩的动作电位。被激活的受体可以被内化,之后它们可以被降解或循环回到细胞表面。这种依赖活动的内化提供了细胞学习的一种潜在方式。对该模型的随机模拟证实,它能够表现出与实际蓝氏贾第鞭毛虫细胞中所见类似的习惯化,包括对强刺激不产生去习惯化以及习惯化过程中单个细胞明显的阶梯状反应。该模型还可以解释先前的两态马尔可夫模型无法解释的几个习惯化特征,即习惯化速率对刺激强度的依赖性,这在两态模型中必须添加,但在受体失活模型中自然出现;刺激停止后反应恢复的速率;高频刺激序列驱动更快习惯化从而导致较低反应概率的能力,以及通过重复多轮训练和恢复对习惯化的增强作用。该模型预测,施加通常不会导致习惯化的高力刺激应会由于作为内部隐藏变量的受体数量减少而使对较弱刺激产生习惯化。我们通过两组涉及强弱刺激交替的新实验证实了这一预测。此外,该模型预测用高力刺激进行训练会延迟对低力刺激的反应恢复,这与我们的新实验数据一致。该模型还预测了阈下积累,即在习惯化达到渐近水平后继续训练应会导致反应恢复延迟,这也得到了新实验的证实。该模型无法解释速率敏感性现象,即较高频率刺激引起的习惯化更容易逆转,导致反应恢复具有频率依赖性。这种速率敏感性在蓝氏贾第鞭毛虫中尚未有报道。在这里,我们进行了一组新的实验,这些实验与该模型关于缺乏速率敏感性的预测一致。这项工作展示了一个简单的模型如何能在实验层面上提出探测单细胞学习的新方法。最后,我们根据核估计器来解释该模型,细胞可能会使用核估计器根据过去刺激的信息(或缺乏该信息)来指导其关于如何对新出现的刺激做出反应的决策。