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非编码 RNA 的一瞥:二级结构、新兴趋势及其在人类疾病中的潜在应用。

A Glimpse of Noncoding RNAs: Secondary Structure, Emerging Trends, and Potential Applications in Human Diseases.

机构信息

The Steve and Cindy Rasmussen Institute for Genomic Medicine, Nationwide Children's Hospital, Columbus, OH, USA.

Institute of Molecular Biology and Biotechnology, The University of Lahore, Lahore, Pakistan.

出版信息

Methods Mol Biol. 2025;2867:331-344. doi: 10.1007/978-1-0716-4196-5_19.

DOI:10.1007/978-1-0716-4196-5_19
PMID:39576590
Abstract

An appealing strategy for the treatment of several diseases is the therapeutic targeting of noncoding RNAs (ncRNAs), such as microRNAs (miRNAs) and long noncoding RNAs (lncRNAs). Many antisense oligonucleotides and small interfering RNAs have been tested in clinical studies over the past 10 years, and several of these have received FDA approval. However, trial results have thus far been mixed, with some studies reporting strong effects and others showing low effectiveness or side effects, including toxicity. Clinical trials for alternative entities like antimiRNAs are underway, and interest in lncRNA-based therapies is constantly growing. From this perspective, we discuss the basic overview of ncRNAs, their significant role as therapeutic biomarkers against different diseases, and the role of secondary structure in noncoding RNAs.

摘要

针对多种疾病的一种有吸引力的治疗策略是针对非编码 RNA(ncRNA)的治疗靶向,例如 microRNAs(miRNAs)和长非编码 RNA(lncRNAs)。在过去的 10 年中,已经在临床研究中测试了许多反义寡核苷酸和小干扰 RNA,其中一些已获得 FDA 批准。然而,迄今为止试验结果喜忧参半,一些研究报告了强烈的效果,而另一些则显示出低有效性或副作用,包括毒性。针对抗 miRNA 等替代实体的临床试验正在进行中,基于 lncRNA 的治疗方法的兴趣也在不断增长。从这个角度来看,我们讨论了 ncRNA 的基本概述、它们作为针对不同疾病的治疗生物标志物的重要作用,以及二级结构在非编码 RNA 中的作用。

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本文引用的文献

1
Oncomeric Profiles of microRNAs as New Therapeutic Targets for Treatment of Ewing's Sarcoma: A Composite Review.微小 RNA 的癌基因谱作为尤文肉瘤治疗的新治疗靶点:综合综述。
Genes (Basel). 2023 Sep 23;14(10):1849. doi: 10.3390/genes14101849.
2
Small interfering RNA (siRNA)-based therapeutic applications against viruses: principles, potential, and challenges.基于小干扰 RNA(siRNA)的抗病毒治疗应用:原理、潜力和挑战。
J Biomed Sci. 2023 Oct 16;30(1):88. doi: 10.1186/s12929-023-00981-9.
3
Targeting miRNAs and Other Non-Coding RNAs as a Therapeutic Approach: An Update.
将微小RNA及其他非编码RNA作为治疗手段:最新进展
Noncoding RNA. 2023 Apr 13;9(2):27. doi: 10.3390/ncrna9020027.
4
RNA-Based Vaccination of Plants for Control of Viruses.基于 RNA 的植物疫苗接种技术在病毒防控中的应用。
Annu Rev Virol. 2022 Sep 29;9(1):521-548. doi: 10.1146/annurev-virology-091919-073708.
5
Secondary structures in RNA synthesis, splicing and translation.RNA合成、剪接和翻译中的二级结构。
Comput Struct Biotechnol J. 2022 May 27;20:2871-2884. doi: 10.1016/j.csbj.2022.05.041. eCollection 2022.
6
Secondary structure prediction of long noncoding RNA: review and experimental comparison of existing approaches.长非编码 RNA 二级结构预测:现有方法的综述与实验比较。
Brief Bioinform. 2022 Jul 18;23(4). doi: 10.1093/bib/bbac205.
7
Targeting non-coding RNAs to overcome cancer therapy resistance.靶向非编码 RNA 以克服癌症治疗耐药性。
Signal Transduct Target Ther. 2022 Apr 13;7(1):121. doi: 10.1038/s41392-022-00975-3.
8
The Roles of the Colon Cancer Associated Transcript 2 (CCAT2) Long Non-Coding RNA in Cancer: A Comprehensive Characterization of the Tumorigenic and Molecular Functions.结肠癌相关转录本 2(CCAT2)长非编码 RNA 在癌症中的作用:肿瘤发生和分子功能的全面特征。
Int J Mol Sci. 2021 Nov 19;22(22):12491. doi: 10.3390/ijms222212491.
9
Long Noncoding RNAs in Neurodegenerative Diseases: Pathogenesis and Potential Implications as Clinical Biomarkers.神经退行性疾病中的长链非编码RNA:发病机制及作为临床生物标志物的潜在意义
Front Mol Neurosci. 2021 Aug 4;14:685143. doi: 10.3389/fnmol.2021.685143. eCollection 2021.
10
Long Non-Coding RNA Epigenetics.长非编码 RNA 表观遗传学。
Int J Mol Sci. 2021 Jun 7;22(11):6166. doi: 10.3390/ijms22116166.