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一种用于类粘蛋白聚电解质凝胶溶胀动力学的计算框架。

A Computational Framework for the Swelling Dynamics of Mucin-like Polyelectrolyte Gels.

作者信息

Du Jian, Nagda Bindi M, Lewis Owen L, Szyld Daniel B, Fogelson Aaron L

机构信息

Department of Mathematical Sciences, Florida Institute of Technology, 150 W. University BLVD, Melbourne, 32901, FL, USA.

Department of Mathematics and Statistics, University of New Mexico, 311 Terrace, Street NE, Albuquerque, 87106, NM, USA.

出版信息

J Nonnewton Fluid Mech. 2023 Mar;313. doi: 10.1016/j.jnnfm.2023.104989. Epub 2023 Jan 13.

Abstract

Gastric mucus is a polyelectrolyte gel that serves as the primary defense of the stomach lining against acid and digestive enzymes. Mucus is released from granules in specialized cells where it is stored at very high concentration. Experiments show that such a dense mucus gel may swell explosively within a short time period, and that this is accompanied by a massive transport of monovalent cations from the extracellular environment into the densely packed mucus in exchange for divalent calcium that had crosslinked the negatively-charged mucus fibers. We propose a 2D computational method for simulating mucus swelling with a two-fluid model. The model includes electro-diffusive transport of ionic species, the coupled motion of the glycoprotein network and hydrating fluid, and chemical interactions between the network and dissolved ions. Each ionic species in the solvent phase is subject to a Nernst-Planck type equation. Together with the electro-neutrality constraint, these equations constitute a system of non-linear parabolic PDEs subject to an algebraic constraint. The discretized system is solved by a Schur complement reduction scheme. Numerical results indicate that the method is very efficient, robust and accurate, even for problems which exhibit large spatial gradients in the concentration of ions. The new method is combined with our previously-published numerical methods for solving the coupled momentum equations of the solvent and network, extended to account for the chemical forces determined from the distribution of ions between solvent and network and in space. The computational effectiveness of the new methods is demonstrated through accuracy and efficiency metrics and through investigation of some of the factors that influence swelling dynamics.

摘要

胃黏液是一种聚电解质凝胶,它是胃黏膜抵御胃酸和消化酶的主要防线。黏液从专门细胞中的颗粒释放出来,这些颗粒中储存着高浓度的黏液。实验表明,如此致密的黏液凝胶可能在短时间内急剧膨胀,并且伴随着一价阳离子从细胞外环境大量转运到紧密堆积的黏液中,以交换与带负电荷的黏液纤维交联的二价钙。我们提出了一种二维计算方法,用双流体模型模拟黏液膨胀。该模型包括离子物种的电扩散输运、糖蛋白网络和水合流体的耦合运动,以及网络与溶解离子之间的化学相互作用。溶剂相中的每种离子物种都服从能斯特 - 普朗克型方程。连同电中性约束,这些方程构成了一个受代数约束的非线性抛物型偏微分方程组。离散化系统通过舒尔补约化方案求解。数值结果表明,该方法非常高效、稳健且准确,即使对于离子浓度存在大空间梯度的问题也是如此。新方法与我们之前发表的用于求解溶剂和网络耦合动量方程的数值方法相结合,并进行了扩展,以考虑由溶剂和网络之间以及空间中离子分布所确定的化学力。通过精度和效率指标以及对一些影响膨胀动力学的因素的研究,证明了新方法的计算有效性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/074f/11584054/2001eb6cfa1c/nihms-1867151-f0001.jpg

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引用本文的文献

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Deswelling Dynamics of Chemically-Active Polyelectrolyte Gels.化学活性聚电解质凝胶的消肿动力学
Comput Sci ICCS. 2023 Jul;14077:332-346. doi: 10.1007/978-3-031-36030-5_27. Epub 2023 Jun 26.

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