Tosh Dilip K, Pavan Matteo, Clark Allison A, Lammers Josie, Villano Serafina, Marri Silvia, Sgambellone Silvia, Choi Suebin, Lee Jihyun, Ivancich Marko S, Bock Hailey A, Campbell Ryan G, Lewicki Sarah A, Levitan Ian M, Chen Eric, Liu Naili, Demby Tamar, Gavrilova Oksana, Gao Zhan-Guo, Lucarini Laura, McCorvy John D, Jacobson Kenneth A
Molecular Recognition Section, Laboratory of Bioorganic Chemistry, National Institutes of Health, Bethesda, Maryland 20892, United States.
Department of Cell Biology, Neurobiology, and Anatomy, Neuroscience Research Center, Medical College of Wisconsin, 8701 Watertown Plank Road, Milwaukee, Wisconsin 53226, United States.
J Med Chem. 2024 Dec 12;67(23):21264-21291. doi: 10.1021/acs.jmedchem.4c02174. Epub 2024 Nov 26.
Rigidified nucleoside derivatives with (N)-methanocarba replacement of ribose have been repurposed as peripheral subtype-selective 5-HT serotonin receptor antagonists for heart and lung fibrosis and intestinal/vascular conditions. 4'-Cyano derivative (MRS8209; , 4.27 nM) was 47-fold (human binding, but not rat and mouse) and 724-fold (functionally) selective at 5-HTR, compared to antitarget 5-HTR, and predicted to form a stable receptor complex using docking and molecular dynamics. 4'-Cyano substituents enhanced 5-HTR affinity (typically 4-5-fold compared to 4'-CHOH), depending on an group larger than methyl. Asymmetric groups (4'-cyano-2-halo derivatives - and ) provided potent 5-HTR values (7-22 nM). A 4'-CHCN substituent was less effective than 4'-CN at increasing 5-HTR affinity, while a 4'-CHF group produced high 5-HT affinity/selectivity. A 2-benzylthio-adenine group with unsubstituted 6-NH shifted the typical selectivity pattern toward potent 5-HT binding. Thus, the SAR suggests that -cyclopentyl-4'-cyano modifications are promising, with an interdependence among the substituent positions.
用(N)-甲碳环取代核糖的刚性核苷衍生物已被重新用作心脏和肺部纤维化以及肠道/血管疾病的外周亚型选择性5-羟色胺(5-HT)血清素受体拮抗剂。4'-氰基衍生物(MRS8209;,4.27 nM)与抗靶点5-HTR相比,在5-HTR上具有47倍(人结合,但大鼠和小鼠不适用)和724倍(功能上)的选择性,并预计通过对接和分子动力学形成稳定的受体复合物。4'-氰基取代基增强了5-HTR亲和力(与4'-CHOH相比通常高4-5倍),这取决于比甲基大的基团。不对称基团(4'-氰基-2-卤代衍生物-和)提供了有效的5-HTR值(7-22 nM)。4'-CHCN取代基在增加5-HTR亲和力方面不如4'-CN有效,而4'-CHF基团产生了高5-羟色胺亲和力/选择性。具有未取代6-NH的2-苄硫基腺嘌呤基团将典型的选择性模式转向有效的5-羟色胺结合。因此,构效关系表明,-环戊基-4'-氰基修饰很有前景,取代基位置之间存在相互依赖性。