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基于基因组挖掘的 Carpatamides I-M 及其候选生物合成基因簇。

Genome-Based Mining of Carpatamides I-M and Their Candidate Biosynthetic Gene Cluster.

机构信息

School of Pharmacy and Bioengineering, Chongqing University of Technology, Chongqing 400054, China.

College of Life Sciences, Jiangxi Normal University, Nanchang 330022, China.

出版信息

Mar Drugs. 2024 Nov 20;22(11):521. doi: 10.3390/md22110521.

DOI:10.3390/md22110521
PMID:39590801
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11595529/
Abstract

Chemically investigating the marine-derived 1268 led to the isolation of a new compound of carpatamide I (). Subsequent genomic analysis identified its candidate biosynthetic gene cluster of approximately 44 kb. In order to obtain more carpatamide derivatives, we conducted the upregulation of Ctd14, which is a positive regulator, and obtained improvement of carpatamide I and four new compounds of carpatamides J-M (-). The structures of the aforementioned five new isolates were identified by a combination of ESI-HRMS as well as one-dimensional (1D) and two-dimensional (2D) spectral NMR datasets. Bioassay results showed that compounds - displayed anti-inflammatory activity and weak cytotoxicity against cell lines of A549, HT-29, and HepG2.

摘要

对海洋来源的 1268 进行化学研究,导致分离出一种新型化合物 carpatamide I ()。随后的基因组分析确定了其候选生物合成基因簇,约为 44 kb。为了获得更多的 carpatamide 衍生物,我们上调了正调控因子 Ctd14,得到了 carpatamide I 的改善和四种新型化合物 carpatamides J-M ()。通过 ESI-HRMS 以及一维 (1D) 和二维 (2D) 光谱 NMR 数据集的组合,确定了上述五个新分离物的结构。生物测定结果表明,化合物 - 具有抗炎活性和对 A549、HT-29 和 HepG2 细胞系的弱细胞毒性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a3f6/11595529/555180de7fb5/marinedrugs-22-00521-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a3f6/11595529/05b9e9fb6409/marinedrugs-22-00521-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a3f6/11595529/b1105212da28/marinedrugs-22-00521-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a3f6/11595529/a5b3ac5ad962/marinedrugs-22-00521-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a3f6/11595529/555180de7fb5/marinedrugs-22-00521-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a3f6/11595529/05b9e9fb6409/marinedrugs-22-00521-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a3f6/11595529/b1105212da28/marinedrugs-22-00521-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a3f6/11595529/a5b3ac5ad962/marinedrugs-22-00521-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a3f6/11595529/555180de7fb5/marinedrugs-22-00521-g004.jpg

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