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来自红螺菌的1,5-二磷酸核酮糖羧化酶/加氧酶的新晶体形式。

New crystal forms of ribulose-1,5-bisphosphate carboxylase/oxygenase from Rhodospirillum rubrum.

作者信息

Schneider G, Brändén C I, Lorimer G

出版信息

J Mol Biol. 1986 Jan 5;187(1):141-3. doi: 10.1016/0022-2836(86)90415-8.

DOI:10.1016/0022-2836(86)90415-8
PMID:3959081
Abstract

Three crystal forms of the dimeric form of the enzyme ribulose-1,5-bisphosphate carboxylase from the photosynthetic bacterium Rhodospirillum rubrum have been obtained from the gene product expressed in Escherichia coli. Form A crystals formed from the quaternary complex comprising enzyme-activator carbamate-Mg2+-2'-carboxyarabinitol-1,5-bisphosphate are shown here to be devoid of ligands. In contrast, crystals of the quaternary complex formed with the hexadecameric L8S8 enzyme from spinach contain both the activator carbamate and 2'-carboxyarabinitol-1,5-bisphosphate. Form B crystals of the R. rubrum enzyme are monoclinic, space group P2(1) with cell dimensions a = 65.5 A, b = 70.6 A, c = 104.1 A and beta = 92.1 degrees, with two subunits per asymmetric unit. Rotation function calculations show a non-crystallographic 2-fold axis perpendicular to the monoclinic b-axis. Form C crystals are orthorhombic (space group P2(1)2(1)2(1)) with cell dimensions a = 79.4 A, b = 100.1 A and c = 131.0 A. The monoclinic crystal form diffracts to at least 2.0 A resolution on a conventional X-ray source.

摘要

已从在大肠杆菌中表达的基因产物获得了光合细菌红螺菌中1,5-二磷酸核酮糖羧化酶二聚体形式的三种晶体形态。由包含酶-激活剂氨基甲酸盐-Mg2+-2'-羧基阿拉伯糖醇-1,5-二磷酸的四聚体复合物形成的A型晶体在此显示没有配体。相比之下,与菠菜的十六聚体L8S8酶形成的四聚体复合物晶体同时含有激活剂氨基甲酸盐和2'-羧基阿拉伯糖醇-1,5-二磷酸。红螺菌酶的B型晶体为单斜晶系,空间群P2(1),晶胞参数a = 65.5 Å,b = 70.6 Å,c = 104.1 Å,β = 92.1°,每个不对称单元有两个亚基。旋转函数计算显示有一个垂直于单斜b轴的非晶体学2重轴。C型晶体为正交晶系(空间群P2(1)2(1)2(1)),晶胞参数a = 79.4 Å,b = 100.1 Å,c = 131.0 Å。在传统X射线源上,单斜晶体形态的衍射分辨率至少为2.0 Å。

相似文献

1
New crystal forms of ribulose-1,5-bisphosphate carboxylase/oxygenase from Rhodospirillum rubrum.来自红螺菌的1,5-二磷酸核酮糖羧化酶/加氧酶的新晶体形式。
J Mol Biol. 1986 Jan 5;187(1):141-3. doi: 10.1016/0022-2836(86)90415-8.
2
The purification and preliminary X-ray diffraction studies of recombinant Synechococcus ribulose-1,5-bisphosphate carboxylase/oxygenase from Escherichia coli.来自大肠杆菌的重组集胞藻1,5-二磷酸核酮糖羧化酶/加氧酶的纯化及初步X射线衍射研究。
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Preliminary X-ray diffraction study of ribulose-1,5-bisphosphate carboxylase from Rhodospirillum rubrum.来自红螺菌的1,5-二磷酸核酮糖羧化酶的初步X射线衍射研究。
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Crystallization of the activated ternary complex of ribulose-1,5-bisphosphate carboxylase-oxygenase isolated from Rhodospirillum rubrum and from an Escherichia coli clone.从深红红螺菌和大肠杆菌克隆体中分离出的1,5-二磷酸核酮糖羧化酶加氧酶活性三元复合物的结晶。
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Crystallization and preliminary x-ray studies of spinach ribulose 1,5-bisphosphate carboxylase/oxygenase complexed with activator and a transition state analogue.菠菜核酮糖-1,5-二磷酸羧化酶/加氧酶与激活剂及过渡态类似物复合物的结晶及初步X射线研究
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Protein liganding to the activator cation of ribulosebisphosphate carboxylase.蛋白质与核酮糖二磷酸羧化酶激活阳离子的结合。
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Crystallographic refinement and structure of ribulose-1,5-bisphosphate carboxylase from Rhodospirillum rubrum at 1.7 A resolution.红螺菌中1,5-二磷酸核酮糖羧化酶在1.7埃分辨率下的晶体学精修与结构
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Carbon isotope effect on carboxylation of ribulose bisphosphate catalyzed by ribulosebisphosphate carboxylase from Rhodospirillum rubrum.碳同位素对红螺菌中核酮糖二磷酸羧化酶催化的核酮糖二磷酸羧化作用的影响。
Biochemistry. 1985 Mar 26;24(7):1603-7. doi: 10.1021/bi00328a005.

引用本文的文献

1
Distance between two active-site lysines of ribulose bisphosphate carboxylase from Rhodospirillum rubrum.从红假单胞菌中提取的核酮糖二磷酸羧化酶的两个活性部位赖氨酸之间的距离。
Proc Natl Acad Sci U S A. 1986 Dec;83(24):9383-7. doi: 10.1073/pnas.83.24.9383.
2
Three-dimensional structure of ribulose-1,5-bisphosphate carboxylase/oxygenase from Rhodospirillum rubrum at 2.9 A resolution.红假单胞菌核酮糖-1,5-二磷酸羧化酶/加氧酶的三维结构,分辨率为 2.9 A。
EMBO J. 1986 Dec 20;5(13):3409-15. doi: 10.1002/j.1460-2075.1986.tb04662.x.
3
Comparison of the crystal structures of L2 and L8S8 Rubisco suggests a functional role for the small subunit.
L2和L8S8核酮糖-1,5-二磷酸羧化酶晶体结构的比较表明小亚基具有功能作用。
EMBO J. 1990 Jul;9(7):2045-50. doi: 10.1002/j.1460-2075.1990.tb07371.x.