Institute of Plant Protection, Liaoning Academy of Agricultural Sciences, Shenyang 110161, China.
Institute of Sorghum, Liaoning Academy of Agricultural Sciences, Shenyang 110161, China.
Int J Mol Sci. 2024 Nov 8;25(22):12000. doi: 10.3390/ijms252212000.
Breeding for dwarfing traits in sorghum is crucial. However, only three genes (-) that control plant height have been mapped. In this study, 634 sorghum cultivars were collected to investigate plant height and genotypes. Four were genotyped (wild type) but with different plant heights, and they were selected to construct two populations and map new dwarf genes. Bulked segregant analysis with whole-genome resequencing of the two populations identified the candidate gene in one same genomic region-on chromosome 7. Then, it was narrowed down to a region containing nine genes. Amino acid and DNA sequence analysis of the parent and offspring plants revealed that two novel allelic mutations in the gene play a role in reducing the plant height-8R262 or 8R417, including 1 bp substitution and 2 bp deletions. Furthermore, we sequenced 19 cultivars that primarily exhibited a "one-dwarf" hybrid or wild-type and presumed another allelic mutation via the amino acid alignment of 8R019, 8R100, and 8R402, which was another one-base substitution. These results indicate that multiple types of allelic mutations in the gene should be considered when identified or applied.
培育矮秆高粱性状至关重要。然而,目前仅已定位到 3 个控制株高的基因(-)。本研究收集了 634 份高粱品种,对株高和基因型进行调查。选取了 4 份野生型但株高不同的材料构建了两个群体,并对新的矮秆基因进行定位。对两个群体的全基因组重测序进行了混池分离分析,在第 7 号染色体的同一基因组区域中发现了候选基因。然后,将其缩小到包含 9 个基因的区域。对亲本和后代植物的氨基酸和 DNA 序列分析表明,基因中的两个新的等位基因突变(8R262 或 8R417)在降低株高方面起作用,包括 1 个碱基替换和 2 个碱基缺失。此外,我们对 19 个主要表现出“一矮”杂种或野生型的品种进行了测序,通过 8R019、8R100 和 8R402 的氨基酸比对,推测了另一个等位基因突变,这是另一个碱基替换。这些结果表明,在鉴定或应用时,应考虑基因中的多种类型的等位基因突变。