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与弹性蛋白变异相关的表型发现。

Phenotypic findings associated with variation in elastin.

作者信息

Justice Anne, Kelly Melissa A, Bellus Gary, Green Joshua D, Zaidi Raza, Kerrins Taylor, Josyula Navya, Luperchio Teresa R, Kozel Beth A, Williams Marc S

机构信息

Department of Population Health, Geisinger, Danville, PA, USA.

Department of Genomic Health, Geisinger, Danville, PA, USA.

出版信息

HGG Adv. 2025 Jan 9;6(1):100388. doi: 10.1016/j.xhgg.2024.100388. Epub 2024 Nov 27.

Abstract

Variation in the elastin gene (ELN) may contribute to connective tissue disease beyond the known disease associations of supravalvar aortic stenosis and cutis laxa. Exome data from MyCode Community Health Initiative participants were analyzed for ELN rare variants (mean allele frequency <1%, not currently annotated as benign). Participants with variants of interest underwent phenotyping by dual chart review using a standardized abstraction tool. Additionally, all rare variants that met inclusion criteria were collapsed into an ELN gene burden score to perform a phenome-wide association study (PheWAS). Two hundred and ninety-six eligible participants with relevant ELN variants were identified from 184,293 MyCode participants. One hundred and three of 254 living participants (41%) met phenotypic criteria, most commonly aortic hypoplasia, arterial dilation, aneurysm, and dissection, and connective tissue abnormalities. ELN variation was significantly (p < 2.8 × 10) associated with "arterial dissection" in the PheWAS and two connective tissue Phecodes approached significance. Variation in ELN is associated with connective tissue pathology beyond classic phenotypes.

摘要

弹性蛋白基因(ELN)的变异可能导致除已知的瓣上主动脉狭窄和皮肤松弛症疾病关联之外的结缔组织疾病。对来自MyCode社区健康倡议参与者的外显子组数据进行分析,以寻找ELN罕见变异(平均等位基因频率<1%,目前未注释为良性)。对具有感兴趣变异的参与者使用标准化提取工具通过双重图表审查进行表型分析。此外,所有符合纳入标准的罕见变异被合并为一个ELN基因负担评分,以进行全表型关联研究(PheWAS)。从184,293名MyCode参与者中确定了296名具有相关ELN变异的合格参与者。254名在世参与者中有103名(41%)符合表型标准,最常见的是主动脉发育不全、动脉扩张、动脉瘤和夹层,以及结缔组织异常。在PheWAS中,ELN变异与“动脉夹层”显著相关(p < 2.8 × 10),并且两个结缔组织表型编码接近显著水平。ELN变异与经典表型之外的结缔组织病理相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/483e/11730535/bcdd9c132495/gr1.jpg

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