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释放伤口愈合潜力:对来自凤梨(Ananas comosus (L.) Merr.)茎的生物活性蛋白组分塔科林(Tacorin)进行综合计算机蛋白质组学和体内分析

Unlocking the wound-healing potential: An integrative in silico proteomics and in vivo analysis of Tacorin, a bioactive protein fraction from Ananas comosus (L.) Merr. Stem.

作者信息

Rahayu Puji, Dermawan Doni, Nailufar Florensia, Sulistyaningrum Erna, Tjandrawinata Raymond R

机构信息

Dexa Laboratories of Biomolecular Sciences, PT Dexa Medica, Jababeka Industrial Estate II, Jl. Industri Selatan V Blok PP No. 7 Cikarang, 17550, Indonesia.

Dexa Laboratories of Biomolecular Sciences, PT Dexa Medica, Jababeka Industrial Estate II, Jl. Industri Selatan V Blok PP No. 7 Cikarang, 17550, Indonesia; Faculty of Biotechnology, Atma Jaya Catholic University of Indonesia, South Jakarta 12930, Indonesia.

出版信息

Biochim Biophys Acta Proteins Proteom. 2025 Jan 1;1873(1):141060. doi: 10.1016/j.bbapap.2024.141060. Epub 2024 Nov 26.

DOI:10.1016/j.bbapap.2024.141060
PMID:39608696
Abstract

Tacorin, a bioactive protein fraction derived from pineapple stem (Ananas comosus), has emerged as a promising therapeutic agent for wound healing. This study employs an integrated approach, combining in silico proteomics and in vivo investigations, to unravel the molecular mechanisms underlying Tacorin's wound healing properties. In the domain of in silico proteomics, the composition of Tacorin is elucidated through LC/MS-MS protein sequencing, revealing ananain (23.77 kDa) and Jacalin-like lectin (14.99 kDa) as its predominant constituents. Molecular protein-protein docking simulations unveil favorable interactions between Tacorin's components and key regulators of wound healing, including TGF-β, TNF-α, and MMP-2. The calculated free binding energies indicate strong binding affinities between Tacorin proteins and their target receptors. Specifically, ananain demonstrates a binding affinity of -12.2 kcal/mol with TGF-β, suggesting its potential as a potent activator of TGF-β-mediated signaling, while Jacalin-like lectin exhibits the most favorable binding affinity of -8.7 kcal/mol with TNF-α. Subsequent 100 ns molecular dynamics (MD) simulations provide insights into the dynamic behavior and stability of Tacorin-receptor complexes, shedding light on the molecular determinants of Tacorin's therapeutic effects. Complementing the in silico analyses, in vivo studies evaluate Tacorin's efficacy in wound healing using skin and uterine incision models. Tacorin treatment accelerates wound closure and promotes tissue repair in both models, as evidenced by macroscopic observations and histological assessments. Overall, this study provides compelling evidence of Tacorin's therapeutic potential in wound healing and underscores the importance of elucidating its molecular mechanisms for further development and clinical translation.

摘要

塔科林是一种从菠萝茎(凤梨)中提取的生物活性蛋白组分,已成为一种有前景的伤口愈合治疗剂。本研究采用综合方法,结合计算机蛋白质组学和体内研究,以揭示塔科林伤口愈合特性背后的分子机制。在计算机蛋白质组学领域,通过液相色谱/质谱联用蛋白质测序阐明了塔科林的组成,揭示菠萝蛋白酶(23.77 kDa)和类jacalin凝集素(14.99 kDa)是其主要成分。分子蛋白质-蛋白质对接模拟揭示了塔科林的组分与伤口愈合关键调节因子(包括转化生长因子-β、肿瘤坏死因子-α和基质金属蛋白酶-2)之间的有利相互作用。计算得到的自由结合能表明塔科林蛋白与其靶受体之间具有强结合亲和力。具体而言,菠萝蛋白酶与转化生长因子-β的结合亲和力为-12.2 kcal/mol,表明其作为转化生长因子-β介导信号的有效激活剂的潜力,而类jacalin凝集素与肿瘤坏死因子-α的结合亲和力最有利,为-8.7 kcal/mol。随后的100 ns分子动力学模拟提供了对塔科林-受体复合物动态行为和稳定性的见解,揭示了塔科林治疗效果的分子决定因素。作为计算机分析的补充,体内研究使用皮肤和子宫切口模型评估了塔科林在伤口愈合中的疗效。宏观观察和组织学评估表明,在这两种模型中,塔科林治疗均加速了伤口闭合并促进了组织修复。总体而言,本研究提供了令人信服的证据,证明塔科林在伤口愈合方面具有治疗潜力,并强调了阐明其分子机制以促进进一步开发和临床转化的重要性。

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