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在东印度患者的胆囊癌进展过程中,表皮生长因子受体(EGFR)与SMAD4呈负相关。

Epidermal Growth Factor Receptor (EGFR) and SMAD4 negatively correlated in the progression of gallbladder cancer in Eastern Indian patients.

作者信息

Choudhury Sounetra, Ghosh Sandip, Chakraborty Prosenjeet, Pal Sayari, Ghosh Koustuv, Saha Subhankar, Midha Jitesh, Sankar Vinu, Mohata Abhisek, Chattopadhyay Bitan Kumar, Ghosh Shibajyoti, Das Soumen, Basu Biswarup, Sikdar Nilabja

机构信息

Human Genetics Unit, Indian Statistical Institute, 203, B. T. Road, Kolkata, 700108, India.

Department of Neuroendocrinology and Experimental Hematology, Chittaranjan National Cancer Research Institute, Kolkata, India.

出版信息

BMC Gastroenterol. 2024 Dec 3;24(1):446. doi: 10.1186/s12876-024-03485-4.

Abstract

BACKGROUND AND INTRODUCTION

Two and half percent of the Indian population suffer from gallbladder cancer (GBC). The primary factors that lead GBC are associated with mutation of several protooncogenes such as EGFR, ERBB2, Myc, and CCND1 along with dysregulation of several tumor suppressor genes such as SMAD4 and CDKN2A. Bacterial infection caused by S.typhi and H.pylori are also hypothesized to be potential factors driving GBC.

AIMS

This study aims to investigate the molecular mechanisms driving the progression of gallbladder adenocarcinoma in Eastern Indian patients. We specifically focussed on analyzing the mutational status of the KRAS gene, examining the amplification of the ERBB2/Her2-neu gene, and evaluating the expression patterns of six dysregulated genes (CCND1, MYC, EGFR, ERBB2/Her2-neu, CDKN2A, SMAD4). Additionally, we assessed the expression status of TGF-beta, the association between bacterial infections (S. Typhi and H. pylori) and GBC, and the impact of single nucleotide polymorphisms in ERBB2/Her2-neu and CCND1 genes within this population.

METHODS

Sixty-seven samples from GBC-diagnosed patients, 26 other unrelated GBC samples for validation cohort, and 68 gallstone tissue samples were collected for this study. Genomic DNA from normal as well as tumor tissues were isolated, exon 2 and exon 3 of KRAS gene were amplified along, DNA sequenced and analyzed. KRAS codon 12 mutation was detected by allele specific PCR (ASPCR) method. Amplification of UreC A (coding for urease subunit α), VacA (coding for Vacuolating cytotoxin A) and CagA genes (coding for cytotoxin-associated gene A) in H.pylori were amplified using PCR. Similarly, FlicC (coding for flagellin gene C) in S.typhi was amplified using PCR. The ERBB2/Her2-neu SNP I655V, and CCND1 SNP A870G were analyzed using PCR followed by RFLP. Expression studies of CCND1, Myc, CDKN2A, ERBB2/Her2-neu, EGFR, and SMAD4 genes were measured in GBC tumor tissues by sybr green quantitative RT PCR.

RESULTS

The oncogenes (EGFR and ERBB2/Her2-neu) were statistically significantly overexpressed and the tumor suppressor gene (SMAD4) downregulated in our GBC tumor patient samples. The EGFR and SMAD4 genes were negatively correlated (r = -0.01) in GBC patients and the data is statistically significant and validated through IHC technique. A significant downregulation of TGF-beta had also been observed. Lower frequency (i.e. 11.5%) of KRAS mutation in GBC tumor was observed.

CONCLUSIONS

EGFR and SMAD4 expression were found to be negatively correlated in GBC tissue samples. ERBB2 overexpression/amplification was observed in 30% of the GBC samples. We also found a low percentage of GBC samples to show KRAS codon 12 mutation in Indian GBC patient population, as had been previously documented in pancreatic cancers.

摘要

背景与引言

2.5%的印度人口患有胆囊癌(GBC)。导致胆囊癌的主要因素与多种原癌基因的突变有关,如表皮生长因子受体(EGFR)、人表皮生长因子受体2(ERBB2)、原癌基因Myc和细胞周期蛋白D1(CCND1),同时也与多种肿瘤抑制基因的失调有关,如SMAD4和细胞周期蛋白依赖性激酶抑制剂2A(CDKN2A)。伤寒杆菌和幽门螺杆菌引起的细菌感染也被认为是导致胆囊癌的潜在因素。

目的

本研究旨在探究印度东部胆囊腺癌患者疾病进展的分子机制。我们特别关注分析KRAS基因的突变状态、检测ERBB2/Her2-neu基因的扩增情况,以及评估六个失调基因(CCND1、MYC、EGFR、ERBB2/Her2-neu、CDKN2A、SMAD4)的表达模式。此外,我们评估了转化生长因子β(TGF-β)的表达状态、细菌感染(伤寒杆菌和幽门螺杆菌)与胆囊癌之间的关联,以及该人群中ERBB2/Her2-neu和CCND1基因单核苷酸多态性的影响。

方法

本研究收集了67例胆囊癌确诊患者的样本、26例其他无关的胆囊癌样本用于验证队列,以及68例胆结石组织样本。分离正常组织和肿瘤组织的基因组DNA,扩增KRAS基因的外显子2和外显子3,进行DNA测序和分析。采用等位基因特异性PCR(ASPCR)方法检测KRAS密码子12突变。使用PCR扩增幽门螺杆菌中尿素酶亚基α(UreC A)基因(编码尿素酶亚基α)、空泡毒素A(VacA)基因(编码空泡毒素A)和细胞毒素相关基因A(CagA)基因(编码细胞毒素相关基因A)。同样,使用PCR扩增伤寒杆菌中的鞭毛蛋白C(FlicC)基因(编码鞭毛蛋白基因C)。采用PCR联合限制性片段长度多态性(RFLP)分析ERBB2/Her2-neu单核苷酸多态性I655V和CCND1单核苷酸多态性A870G。通过SYBR Green定量逆转录PCR检测胆囊癌肿瘤组织中CCND1、Myc、CDKN2A、ERBB2/Her2-neu、EGFR和SMAD4基因的表达情况。

结果

在我们的胆囊癌肿瘤患者样本中,原癌基因(EGFR和ERBB2/Her2-neu)在统计学上显著过表达,而肿瘤抑制基因(SMAD4)下调。在胆囊癌患者中,EGFR和SMAD4基因呈负相关(r = -0.01),数据具有统计学意义,并通过免疫组织化学(IHC)技术得到验证。还观察到TGF-β显著下调。在胆囊癌肿瘤中观察到KRAS突变的频率较低(即11.5%)。

结论

在胆囊癌组织样本中发现EGFR和SMAD4表达呈负相关。在30%的胆囊癌样本中观察到ERBB2过表达/扩增。我们还发现,在印度胆囊癌患者群体中,显示KRAS密码子12突变的胆囊癌样本比例较低,这与先前在胰腺癌中的记录一致。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd8f/11613908/5c1cec514b48/12876_2024_3485_Fig1_HTML.jpg

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