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实验进化揭示了进化偏差及其成因。

Experimental evolution reveals evolutionary bias and its causes.

作者信息

Wu Haoyuan, Wu Yonghua

机构信息

School of Life Sciences, Northeast Normal University, 5268 Renmin Street, Changchun, 130024, China.

Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China.

出版信息

BMC Ecol Evol. 2024 Dec 2;24(1):145. doi: 10.1186/s12862-024-02331-1.

Abstract

BACKGROUND

Species generally exhibits evolutionary bias, adapting towards a specific direction rather than others, yet the underlying causes remains unknown.

RESULTS

Here, we investigated evolutionary bias and its causes by conducting experimental evolution on Escherichia coli. We introduced an E. coli strain (lac-), initially unable to utilize lactose due to a frameshift mutation, into two different culture media: one medium (L) containing ample sodium acetate and lactose as carbon sources, and the other medium (G) containing abundant glucose and lactose as carbon sources. After 20 days of experimental evolution, our findings revealed that all L-populations underwent parallel evolution through reverse mutation to utilize lactose (lac+), resulting in a relatively higher fitness gain compared to utilizing sodium acetate. In contrast, all G-populations did not transition towards lactose utilization but instead continued to utilize glucose, which provides a higher fitness gain than utilizing lactose. These results demonstrate that our experimental populations in L and G media respectively exhibit biased evolution towards utilizing different carbon sources, yet all trajectories converge towards higher fitness gains. When lac+ (lactose-eater) and lac- (acetate-eater) were co-cultured in L medium, all lac- individuals were eventually eliminated, while lac + individuals were consistently selected and retained.

CONCLUSIONS

Our findings indicate that species tend to evolve with a bias towards directions that offer higher fitness gains, partly because high-fitness-gain directions competitively exclude low-fitness-gain directions.

摘要

背景

物种通常表现出进化偏向性,朝着特定方向而非其他方向进化,但其潜在原因尚不清楚。

结果

在此,我们通过对大肠杆菌进行实验进化来研究进化偏向性及其原因。我们将一种最初因移码突变而无法利用乳糖的大肠杆菌菌株(lac-)引入两种不同的培养基中:一种培养基(L)含有充足的醋酸钠和乳糖作为碳源,另一种培养基(G)含有丰富的葡萄糖和乳糖作为碳源。经过20天的实验进化,我们的研究结果表明,所有L群体都通过反向突变实现了平行进化以利用乳糖(lac+),与利用醋酸钠相比,其适应性增益相对更高。相比之下,所有G群体并未向利用乳糖转变,而是继续利用葡萄糖,利用葡萄糖比利用乳糖能提供更高的适应性增益。这些结果表明,我们在L和G培养基中的实验群体分别表现出向利用不同碳源的偏向性进化,但所有轨迹都趋向于更高的适应性增益。当lac+(乳糖利用者)和lac-(醋酸利用者)在L培养基中共培养时,所有lac-个体最终被淘汰,而lac+个体则持续被选择并保留。

结论

我们的研究结果表明,物种倾向于朝着能提供更高适应性增益的方向进化,部分原因是高适应性增益方向会竞争性地排除低适应性增益方向。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7259/11613857/ffb20d2a2a32/12862_2024_2331_Fig1_HTML.jpg

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