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利用时空卷积神经网络加速同时多层磁共振指纹识别

Acceleration of Simultaneous Multislice Magnetic Resonance Fingerprinting With Spatiotemporal Convolutional Neural Network.

作者信息

Lu Lan, Liu Yilin, Zhou Amy, Yap Pew-Thian, Chen Yong

机构信息

Department of Radiation Oncology, Cleveland Clinic, Cleveland, Ohio, USA.

Department of Computer Science, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.

出版信息

NMR Biomed. 2025 Jan;38(1):e5302. doi: 10.1002/nbm.5302.

DOI:10.1002/nbm.5302
PMID:39631961
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11758274/
Abstract

Magnetic Resonance Fingerprinting (MRF) can be accelerated with simultaneous multislice (SMS) imaging for joint T and T quantification. However, the high inter-slice and in-plane acceleration in SMS-MRF causes severe aliasing artifacts, limiting the multiband (MB) factors to typically 2 or 3. Deep learning has demonstrated superior performance compared to the conventional dictionary matching approach for single-slice MRF, but its effectiveness in SMS-MRF remains unexplored. In this paper, we introduced a new deep learning approach with decoupled spatiotemporal feature learning for SMS-MRF to achieve high MB factors for accurate and volumetric T and T quantification in neuroimaging. The proposed method leverages information from both spatial and temporal domains to mitigate the significant aliasing in SMS-MRF. Neural networks, trained using either acquired SMS-MRF data or simulated data generated from single-slice MRF acquisitions, were evaluated. The performance was further compared with both dictionary matching and a deep learning approach based on residual channel attention U-Net. Experimental results demonstrated that the proposed method, trained with acquired SMS-MRF data, achieves the best performance in brain T and T quantification, outperforming dictionary matching and residual channel attention U-Net. With a MB factor of 4, rapid T and T mapping was achieved with 1.5 s per slice for quantitative brain imaging.

摘要

磁共振指纹识别(MRF)可通过同时多层(SMS)成像加速,用于联合T1和T2定量分析。然而,SMS-MRF中较高的层间和平面内加速会导致严重的混叠伪影,将多频段(MB)因子限制在通常为2或3。与传统的单切片MRF字典匹配方法相比,深度学习已显示出卓越的性能,但其在SMS-MRF中的有效性仍未得到探索。在本文中,我们为SMS-MRF引入了一种新的深度学习方法,该方法具有解耦的时空特征学习,以实现高MB因子,用于神经成像中准确的容积T1和T2定量分析。所提出的方法利用空间和时间域的信息来减轻SMS-MRF中的显著混叠。对使用采集的SMS-MRF数据或从单切片MRF采集生成的模拟数据训练的神经网络进行了评估。将性能与字典匹配和基于残差通道注意力U-Net的深度学习方法进行了进一步比较。实验结果表明,使用采集的SMS-MRF数据训练的所提出方法在脑T1和T2定量分析中实现了最佳性能,优于字典匹配和残差通道注意力U-Net。在MB因子为4的情况下,实现了快速的T1和T2映射,每切片1.5秒用于定量脑成像。

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Acceleration of Simultaneous Multislice Magnetic Resonance Fingerprinting With Spatiotemporal Convolutional Neural Network.利用时空卷积神经网络加速同时多层磁共振指纹识别
NMR Biomed. 2025 Jan;38(1):e5302. doi: 10.1002/nbm.5302.
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本文引用的文献

1
Improving motion robustness of 3D MR fingerprinting with a fat navigator.利用脂肪导航改善 3D MR 指纹成像的运动鲁棒性。
Magn Reson Med. 2023 Nov;90(5):1802-1817. doi: 10.1002/mrm.29761. Epub 2023 Jun 22.
2
Cramér-Rao bound-informed training of neural networks for quantitative MRI.基于克拉美-罗界的神经网络在定量 MRI 中的训练。
Magn Reson Med. 2022 Jul;88(1):436-448. doi: 10.1002/mrm.29206. Epub 2022 Mar 28.
3
Optimized multi-axis spiral projection MR fingerprinting with subspace reconstruction for rapid whole-brain high-isotropic-resolution quantitative imaging.
基于子空间重建的优化多轴螺旋投影磁共振指纹识别技术用于快速全脑高各向同性分辨率定量成像
Magn Reson Med. 2022 Jul;88(1):133-150. doi: 10.1002/mrm.29194. Epub 2022 Feb 24.
4
Free-Breathing Abdominal Magnetic Resonance Fingerprinting Using a Pilot Tone Navigator.自由呼吸腹部磁共振指纹成像技术采用导频导航。
J Magn Reson Imaging. 2021 Oct;54(4):1138-1151. doi: 10.1002/jmri.27673. Epub 2021 May 5.
5
Accelerated white matter lesion analysis based on simultaneous and quantification using magnetic resonance fingerprinting and deep learning.基于磁共振指纹成像和深度学习的同时定量加速白质病变分析。
Magn Reson Med. 2021 Jul;86(1):471-486. doi: 10.1002/mrm.28688. Epub 2021 Feb 5.
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Retrospective rigid motion correction of three-dimensional magnetic resonance fingerprinting of the human brain.人类大脑三维磁共振指纹图谱的回顾性刚性运动校正
Magn Reson Med. 2020 Nov;84(5):2606-2615. doi: 10.1002/mrm.28301. Epub 2020 May 5.
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Submillimeter MR fingerprinting using deep learning-based tissue quantification.使用基于深度学习的组织定量分析的亚毫米磁共振指纹识别技术。
Magn Reson Med. 2020 Aug;84(2):579-591. doi: 10.1002/mrm.28136. Epub 2019 Dec 19.
8
High-resolution 3D MR Fingerprinting using parallel imaging and deep learning.基于并行成像和深度学习的高分辨率 3D MR 指纹成像技术
Neuroimage. 2020 Feb 1;206:116329. doi: 10.1016/j.neuroimage.2019.116329. Epub 2019 Nov 2.
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Fast 3D brain MR fingerprinting based on multi-axis spiral projection trajectory.基于多轴螺旋投影轨迹的快速 3D 脑磁共振指纹成像。
Magn Reson Med. 2019 Jul;82(1):289-301. doi: 10.1002/mrm.27726. Epub 2019 Mar 18.
10
Deep Learning for Fast and Spatially Constrained Tissue Quantification From Highly Accelerated Data in Magnetic Resonance Fingerprinting.深度学习在磁共振指纹成像中从高度加速的数据中快速且空间受限的组织定量。
IEEE Trans Med Imaging. 2019 Oct;38(10):2364-2374. doi: 10.1109/TMI.2019.2899328. Epub 2019 Feb 13.