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2016年至2022年法国巴黎产OXA-48的ST-22在患者及医院环境中的持续存在情况

Persistence of OXA-48-producing ST-22 in patients and the hospital environment, Paris, France, 2016 to 2022.

作者信息

Jolivet Sarah, Couturier Jeanne, Le Neindre Killian, Ehmig Muriel, Dortet Laurent, Emeraud Cécile, Barbut Frédéric

机构信息

Unité de prévention du risque infectieux, Hôpital Saint-Antoine, Assistance Publique - Hôpitaux de Paris, Paris, France.

Service de microbiologie de l'environnement, Hôpital Saint-Antoine, Assistance Publique - Hôpitaux de Paris, Paris, France.

出版信息

Euro Surveill. 2024 Dec;29(49). doi: 10.2807/1560-7917.ES.2024.29.49.2400262.

Abstract

In 2016-2019, hospital A's haematology ward experienced an outbreak of OXA-48-producing ST-22 strains, with toilets identified as source of transmission. Between 2020 and 2022, 28 strains of OXA-48-producing ST-22 were isolated on other wards. This study aimed to determine whether all OXA-48-producing ST-22 strains belonged to the same clone and to investigate the persistence of this clone using whole genome sequencing. OXA-48-producing ST-22 strains collected from patients (n = 33) and from the hospital environment (n = 20) of seven wards were sequenced using Illumina technology and clonal relationships were determined using single nucleotide polymorphism (SNP). Phylogenetic analyses were performed on 53 strains from hospital A and on 240 epidemiologically unrelated carbapenem-resistant ST-22 isolated from elsewhere in France. SNP analysis suggested long-lasting persistence of the same clone for more than 6 years. Phylogenetic analysis showed that 52 of 53 strains isolated in hospital A belonged to the same cluster and were different from the 240 epidemiologically unrelated ST-22. Our data suggest that this clone can persist in hospital environments for years, representing a risk for hospital-acquired infections and outbreaks. Reservoir management is essential to prevent further transmission.

摘要

在2016年至2019年期间,A医院血液科病房爆发了产OXA-48的ST-22菌株感染,已确定厕所为传播源。在2020年至2022年期间,在其他病房分离出28株产OXA-48的ST-22菌株。本研究旨在确定所有产OXA-48的ST-22菌株是否属于同一克隆,并使用全基因组测序研究该克隆的持续性。使用Illumina技术对从七个病房的患者(n = 33)和医院环境(n = 20)中收集的产OXA-48的ST-22菌株进行测序,并使用单核苷酸多态性(SNP)确定克隆关系。对来自A医院的53株菌株以及从法国其他地方分离出的240株与流行病学无关的耐碳青霉烯类ST-22菌株进行了系统发育分析。SNP分析表明同一克隆持续存在超过6年。系统发育分析表明,A医院分离出的53株菌株中有52株属于同一簇,与240株与流行病学无关的ST-22不同。我们的数据表明,该克隆可在医院环境中持续存在数年,这对医院获得性感染和暴发构成风险。蓄水池管理对于防止进一步传播至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/789a/11650478/0b41d34db83f/2400262-f1.jpg

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