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涉及临床和环境菌株的多物种产碳青霉烯酶肠杆菌暴发中的质粒传播:一项叙述性综述

Plasmid Dissemination in Multispecies Carbapenemase-Producing Enterobacterales Outbreaks Involving Clinical and Environmental Strains: A Narrative Review.

作者信息

Alglave Louis, Faure Karine, Mullié Catherine

机构信息

Centre d'appui pour la Prévention des Infections Associées aux Soins (CPias) Hauts-de-France, Home des Infirmiers, Avenue Oscar Lambret, 59037 Lille, Cedex, France.

EA7366, Translational Research Host-Pathogen Relation, Centre Hospitalier Universitaire de Lille, Université de Lille, 59000 Lille, France.

出版信息

Microorganisms. 2025 Apr 2;13(4):810. doi: 10.3390/microorganisms13040810.

Abstract

Outbreaks involving carbapenemase-producing enterobacteria (CPE) have become a common occurrence in healthcare settings. While clonal dissemination is firmly established as a cause for these outbreaks, horizontal gene transfers (HGTs) between different species of Enterobacterales found in clinical and environmental isolates are less so. To gather evidence backing up this hypothesis, a review covering the 2013-2024 period was performed. HGTs between different species of clinical and environmental were identified in thirteen papers, half of those published within the last three years. A combination of short- and long-read whole genome sequencing (WGS) was predominantly used to identify mobile genetic elements and plasmids. The more frequently reported carbapenemases were KPCs, followed by NDMs and IMPs. Predictably, broad-host-range plasmids were responsible for over 50% of HGTs, with the IncA/C group being in the lead. and complexes were the most frequent species identified in clinical samples, while dominated environmental ones. Drains and pipework frequently constituted CPE reservoirs in protracted outbreaks, alternating epidemic outbursts with silent phases. Including WGS in a systematic environmental surveillance would help in swiftly identifying those CPE reservoirs and possibly help better control plasmid outbursts by allowing the implementation of adequate infection prevention and control measures.

摘要

涉及产碳青霉烯酶肠杆菌(CPE)的暴发在医疗机构中已屡见不鲜。虽然克隆传播已被确认为这些暴发的一个原因,但临床和环境分离株中不同肠杆菌科物种之间的水平基因转移(HGT)情况则了解较少。为了收集支持这一假设的证据,我们对2013年至2024年期间的文献进行了综述。在13篇论文中发现了临床和环境不同物种之间的HGT,其中一半是在过去三年发表的。短读长和长读长全基因组测序(WGS)相结合的方法主要用于识别移动遗传元件和质粒。报道较多的碳青霉烯酶是KPCs,其次是NDMs和IMPs。可以预见,广宿主范围质粒导致了超过50%的HGT,其中IncA/C组占主导地位。临床样本中最常鉴定出的物种是 和 复合体,而环境样本中则以 为主。在长期暴发中,排水管道经常构成CPE储存库,在流行暴发和静止期交替出现。将WGS纳入系统的环境监测将有助于迅速识别这些CPE储存库,并可能通过实施适当的感染预防和控制措施,更好地控制质粒暴发。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8868/12029780/220463ca855c/microorganisms-13-00810-g001.jpg

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