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中国西南地区15个民族4个语系听力损失患者的DNA变异谱

Spectrum of DNA variants for patients with hearing loss in 4 language families of 15 ethnicities from Southwestern China.

作者信息

Li Jingyu, Zhou Shiyu, Pei Jiahong, Li Wanzhen, Cui Rongjie, Ren Xiaofei, Wei Jingru, Li Qian, Zhu Baosheng, Sa Yaliang, Li Yunlong

机构信息

Department of Medical Genetics, the First People's Hospital of Yunnan Province, Kunming, Yunnan, China.

the Affiliated Hospital of Kunming University of Science and Technology, No.157 Jinbi Road, Kunming, 650032, Yunnan, China.

出版信息

Heliyon. 2024 Oct 2;10(20):e38802. doi: 10.1016/j.heliyon.2024.e38802. eCollection 2024 Oct 30.

Abstract

Hearing loss is a common disease. More than 100 genes have been reported to be associated with hereditary hearing loss. However, the distribution of these genes and their variants across diverse populations remains unclear. In this study, we gathered 347 hearing-impaired patients from four language families (Sinitic, Tibeto-Burman, Kra-Dai, and Hmong-Mien) in Southwestern China, excluding cases caused by common mutations in the gene. By using next generation sequencing, 122 genes associated with hereditary hearing loss were analyzed on these patients. Rare candidate variants were identified in 71.93 % (264/347) of patients with hearing loss. The diagnostic rate varied around 10 % across different language families. The most frequently identified causative genes in successfully diagnosed cases were , and . Moreover, a substantial number of variants of unknown significance (VUS) were identified in our patient cohort. This underscores the critical need for establishing ethnicity-specific genomic databases for hearing loss. It will significantly improve the clinical diagnostic rate for hearing loss in this region.

摘要

听力损失是一种常见疾病。据报道,超过100个基因与遗传性听力损失有关。然而,这些基因及其变体在不同人群中的分布仍不清楚。在本研究中,我们收集了来自中国西南部四个语系(汉藏语系、藏缅语族、壮侗语族和苗瑶语族)的347名听力受损患者,排除了由该基因常见突变引起的病例。通过使用下一代测序技术,对这些患者分析了122个与遗传性听力损失相关的基因。在71.93%(264/347)的听力损失患者中鉴定出罕见的候选变体。不同语系的诊断率约为10%。在成功诊断的病例中,最常鉴定出的致病基因是 、 和 。此外,在我们的患者队列中鉴定出大量意义未明的变体(VUS)。这突出了建立针对听力损失的特定种族基因组数据库的迫切需求。这将显著提高该地区听力损失的临床诊断率。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1d4/11620035/abb11ead8656/gr1.jpg

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