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肽凝聚物在细胞内递送以形成稳定的相互作用中心

Delivery of Peptide Coacervates to Form Stable Interaction Hubs in Cells.

作者信息

Tu Wangjie, Theisen Rachel Q, Jin Pengfei, Chenoweth David M, Patel Amish J, Good Matthew C

机构信息

Bioengineering Graduate Group, University of Pennsylvania, PA 19104.

Department of Cell and Developmental Biology, University of Pennsylvania, PA 19104.

出版信息

bioRxiv. 2024 Dec 11:2024.11.26.625566. doi: 10.1101/2024.11.26.625566.

DOI:10.1101/2024.11.26.625566
PMID:39651133
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11623604/
Abstract

Cells contain membrane-bound and membraneless organelles that operate as spatially distinct biochemical niches. However, these subcellular reaction centers lose fidelity with aging and as a result of disease. A grand challenge for biomedicine is restoring or augmenting cellular functionalities. Although commonly tackled by gene replacement therapy, an excited new strategy is the delivery of protein-based materials that can directly interact with and alter biological networks inside a cell. In this study we sought to develop long-lasting materials capable of cellular uptake and incorporation, akin to an artificial organelle or intracellular interaction hub. Drawing inspiration from protein-based membranelles organelles, we developed a new delivery method to transplant micron size peptide-based compartments into living cells. We determined conditions to form large stable coacervates that are efficiently taken up by a variety of useful cell types and demonstrate their intracellular stability over time. We developed tools to enhance the extent and spatial organization of cargo loading into these coacervates, including co-assembly of nanobodies that selectively bind to targets of interest. Combining them together, we demonstrate successful targeting of GFP protein inside cells. These results represent an important first step toward the development of deliverable synthetic organelles that can be fabricated in vitro and taken up by cells for applications in cell engineering and regenerative medicine.

摘要

细胞含有膜结合和无膜细胞器,它们作为空间上不同的生化微环境发挥作用。然而,这些亚细胞反应中心会随着衰老和疾病而失去保真度。生物医学面临的一个重大挑战是恢复或增强细胞功能。虽然通常通过基因替代疗法来解决,但一种令人兴奋的新策略是递送基于蛋白质的材料,这些材料可以直接与细胞内的生物网络相互作用并改变它们。在这项研究中,我们试图开发能够被细胞摄取和整合的长效材料,类似于人工细胞器或细胞内相互作用中心。从基于蛋白质的微膜细胞器中获得灵感,我们开发了一种新的递送方法,将微米级基于肽的区室移植到活细胞中。我们确定了形成大的稳定凝聚层的条件,这些凝聚层能被多种有用的细胞类型有效摄取,并证明它们在细胞内随时间的稳定性。我们开发了工具来提高货物装载到这些凝聚层中的程度和空间组织,包括共同组装选择性结合感兴趣靶标的纳米抗体。将它们结合在一起,我们展示了在细胞内成功靶向绿色荧光蛋白。这些结果代表了朝着开发可递送的合成细胞器迈出的重要第一步,这种细胞器可以在体外制造并被细胞摄取,用于细胞工程和再生医学应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a13e/11639313/996538eb9afb/nihpp-2024.11.26.625566v2-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a13e/11639313/ba7f58fe44a5/nihpp-2024.11.26.625566v2-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a13e/11639313/b7ee80f3dfcb/nihpp-2024.11.26.625566v2-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a13e/11639313/1e26d484b6ed/nihpp-2024.11.26.625566v2-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a13e/11639313/9cd8a67dd614/nihpp-2024.11.26.625566v2-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a13e/11639313/996538eb9afb/nihpp-2024.11.26.625566v2-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a13e/11639313/ba7f58fe44a5/nihpp-2024.11.26.625566v2-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a13e/11639313/b7ee80f3dfcb/nihpp-2024.11.26.625566v2-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a13e/11639313/1e26d484b6ed/nihpp-2024.11.26.625566v2-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a13e/11639313/9cd8a67dd614/nihpp-2024.11.26.625566v2-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a13e/11639313/996538eb9afb/nihpp-2024.11.26.625566v2-f0005.jpg

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本文引用的文献

1
Phase-separating peptide coacervates with programmable material properties for universal intracellular delivery of macromolecules.相分离肽凝聚物具有可编程的材料特性,可用于实现大分子的通用细胞内递送。
Nat Commun. 2024 Nov 21;15(1):10094. doi: 10.1038/s41467-024-54463-z.
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Cellular Uptake of Phase-Separating Peptide Coacervates.相分离肽凝聚体的细胞摄取。
Adv Sci (Weinh). 2024 Nov;11(42):e2402652. doi: 10.1002/advs.202402652. Epub 2024 Aug 30.
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Kinetics of RNA-LNP delivery and protein expression.RNA-LNP 递呈和蛋白表达的动力学。
Eur J Pharm Biopharm. 2024 Apr;197:114222. doi: 10.1016/j.ejpb.2024.114222. Epub 2024 Feb 20.
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Determinants that enable disordered protein assembly into discrete condensed phases.能够使紊乱的蛋白质组装成离散凝聚相的决定因素。
Nat Chem. 2024 Jul;16(7):1062-1072. doi: 10.1038/s41557-023-01423-7. Epub 2024 Feb 5.
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Dipeptide coacervates as artificial membraneless organelles for bioorthogonal catalysis.二肽凝聚体作为无膜人工细胞器用于生物正交催化。
Nat Commun. 2024 Jan 2;15(1):39. doi: 10.1038/s41467-023-44278-9.
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Redox-Responsive Phase-Separating Peptide as a Universal Delivery Vehicle for CRISPR/Cas9 Genome Editing Machinery.氧化还原响应性相分离肽作为 CRISPR/Cas9 基因组编辑工具的通用递送载体。
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Condensed-phase signaling can expand kinase specificity and respond to macromolecular crowding.凝聚相信号转导可以扩大激酶的特异性并响应大分子拥挤。
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Phase-separating peptides for direct cytosolic delivery and redox-activated release of macromolecular therapeutics.用于直接胞质递送和氧化还原激活释放大分子治疗药物的相分离肽。
Nat Chem. 2022 Mar;14(3):274-283. doi: 10.1038/s41557-021-00854-4. Epub 2022 Feb 3.
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Designer membraneless organelles sequester native factors for control of cell behavior.设计无膜细胞器隔离天然因子以控制细胞行为。
Nat Chem Biol. 2021 Sep;17(9):998-1007. doi: 10.1038/s41589-021-00840-4. Epub 2021 Aug 2.