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酶促反应网络驱动的聚合诱导瞬态凝聚

Enzymatic Reaction Network-Driven Polymerization-Induced Transient Coacervation.

作者信息

Sharma Surbhi, Belluati Andrea, Kumar Mohit, Dhiman Shikha

机构信息

Department of Chemistry, Johannes Gutenberg University Mainz, Duesbergweg 10-14, Mainz, 55122, Germany.

Department of Chemistry and Centre for Synthetic Biology, Technical University of Darmstadt, Peter-Grünberg-Straße 4, Darmstadt, 64287, Germany.

出版信息

Angew Chem Int Ed Engl. 2024 Dec 10;64(11):e202421620. doi: 10.1002/anie.202421620.

DOI:10.1002/anie.202421620
PMID:39655501
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11891636/
Abstract

A living cell has a highly complex microenvironment whereas numerous enzyme-driven processes are active at once. These procedures are incredibly accurate and efficient, although comparable control has not yet been established in vitro. Here, we design an enzymatic reaction network (ERN) that combines antagonistic and orthogonal enzymatic networks to produce adjustable dynamics of ATP-fueled transient coacervation. Using horseradish peroxidase (HRP)-mediated Biocatalytic Atom Transfer Radical Polymerization (BioATRP), we synthesized poly(dimethylaminoethyl methacrylate), which subsequently formed coacervates with ATP. We rationally explored enzymatic control over coacervation and dissolution, using orthogonal and antagonistic enzyme pairs viz., alkaline phosphatase, Creatine phosphokinase, hexokinase, esterase, and urease. ATP-fuelled coacervates also demonstrate the enzymatic catalysis to prove its potential to be exploited as a cellular microreactor. Additionally, we developed ERN-polymerization-induced transient coacervation (ERN-PIC), with complete control over the system, polymerization, coacervation, and dissolution. Notably, the coacervation process itself determines functional properties, as seen in selective cargo uptake. The strategy offers cutting-edge biomimetic applications, and insights into cellular compartmentalization by bridging the gap between synthetic and biological systems. The development of temporally programmed coacervation is promising for the spatial arrangement of multienzyme cascades, and offers novel ideas on the architecture of artificial cells.

摘要

活细胞具有高度复杂的微环境,同时众多酶驱动的过程会同时活跃进行。这些过程极其精确和高效,尽管在体外尚未建立类似的调控机制。在此,我们设计了一个酶促反应网络(ERN),它结合了拮抗和正交的酶网络,以产生由ATP驱动的可调节的瞬时凝聚动力学。利用辣根过氧化物酶(HRP)介导的生物催化原子转移自由基聚合(BioATRP),我们合成了聚甲基丙烯酸二甲氨基乙酯,其随后与ATP形成凝聚物。我们合理地探索了对凝聚和溶解的酶促控制,使用了正交和拮抗的酶对,即碱性磷酸酶、肌酸磷酸激酶、己糖激酶、酯酶和脲酶。由ATP驱动的凝聚物还展示了酶催化作用,以证明其作为细胞微反应器被开发利用的潜力。此外,我们开发了ERN-聚合诱导的瞬时凝聚(ERN-PIC),对系统、聚合、凝聚和溶解具有完全的控制。值得注意的是,凝聚过程本身决定了功能特性,如在选择性货物摄取中所见。该策略提供了前沿的仿生应用,并通过弥合合成系统与生物系统之间的差距,深入了解细胞区室化。时间编程凝聚的发展对于多酶级联反应的空间排列很有前景,并为人工细胞的架构提供了新的思路。

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本文引用的文献

1
Did the exposure of coacervate droplets to rain make them the first stable protocells?凝聚体液滴暴露在雨中是否使它们成为第一个稳定的原细胞?
Sci Adv. 2024 Aug 23;10(34):eadn9657. doi: 10.1126/sciadv.adn9657. Epub 2024 Aug 21.
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Enzymatic Reaction-Coupled, Cooperative Supramolecular Polymerization.酶促反应偶联协同超分子聚合。
J Am Chem Soc. 2024 May 29;146(21):14844-14855. doi: 10.1021/jacs.4c03588. Epub 2024 May 15.
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Controlled Supramolecular Polymerization via Bioinspired, Liquid-Liquid Phase Separation of Monomers.
通过受生物启发的单体液-液相分离控制超分子聚合。
J Am Chem Soc. 2024 May 8;146(18):12577-12586. doi: 10.1021/jacs.4c01377. Epub 2024 Apr 29.
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Glucose-Driven Droplet Formation in Complexes of a Supramolecular Peptide and Therapeutic Protein.葡萄糖驱动的超分子肽和治疗性蛋白复合物中的液滴形成。
J Am Chem Soc. 2024 Mar 20;146(11):7498-7505. doi: 10.1021/jacs.3c13139. Epub 2024 Mar 11.
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Supramolecular polymers form tactoids through liquid-liquid phase separation.超分子聚合物通过液-液相分离形成原纤。
Nature. 2024 Feb;626(8001):1011-1018. doi: 10.1038/s41586-024-07034-7. Epub 2024 Feb 28.
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Dipeptide coacervates as artificial membraneless organelles for bioorthogonal catalysis.二肽凝聚体作为无膜人工细胞器用于生物正交催化。
Nat Commun. 2024 Jan 2;15(1):39. doi: 10.1038/s41467-023-44278-9.
7
Enzyme-Mediated Temporal Control over the Conformational Disposition of a Condensed Protein in Macromolecular Crowded Media.酶介导的大分子拥挤介质中凝聚蛋白构象排布的时间控制
J Phys Chem B. 2023 Dec 14;127(49):10508-10517. doi: 10.1021/acs.jpcb.3c07074. Epub 2023 Dec 5.
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Artificial cell synthesis using biocatalytic polymerization-induced self-assembly.使用生物催化聚合诱导自组装进行人工细胞合成。
Nat Chem. 2024 Apr;16(4):564-574. doi: 10.1038/s41557-023-01391-y. Epub 2023 Dec 4.
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Liquid Droplets as Emerging Biomaterials.作为新兴生物材料的液滴
Acc Mater Res. 2023 Jul 13;4(9):729-732. doi: 10.1021/accountsmr.3c00098. eCollection 2023 Sep 22.
10
Coacervate Droplets for Synthetic Cells.凝聚体液滴用于合成细胞。
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