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对人体主动脉组织的差异表达分析揭示了与腹主动脉瘤发生和进展相关的新基因和通路。

Differential Expression Analyses on Human Aortic Tissue Reveal Novel Genes and Pathways Associated With Abdominal Aortic Aneurysm Onset and Progression.

作者信息

Temprano-Sagrera Gerard, Peypoch Olga, Soto Begoña, Dilmé Jaume, Calsina Juscafresa Laura, Davtian David, de la Rosa Estadella Mireia, Nieto Lluís, Brown Andrew, Escudero José Román, Viñuela Ana, Camacho Mercedes, Sabater-Lleal Maria

机构信息

Unit of Genomics of Complex Diseases Institut de Recerca Sant Pau (IR SANT PAU) Barcelona Spain.

Servei d'Angiologia i Cirurgia Vascular i Endovascular Hospital de la Santa Creu i Sant Pau Barcelona Spain.

出版信息

J Am Heart Assoc. 2024 Dec 17;13(24):e036082. doi: 10.1161/JAHA.124.036082. Epub 2024 Dec 10.

Abstract

BACKGROUND

Abdominal aortic aneurysms (AAAs) are focal dilatations of the abdominal aorta that expand progressively, increasing their risk of rupture. Rupture of an AAA is associated with high mortality rates, but the mechanisms underlying the initiation, expansion, and rupture of AAAs are not yet fully understood. We aimed to characterize the pathophysiology of AAAs and identify new genes associated with AAA initiation and progression.

METHODS AND RESULTS

This study used RNA sequencing data on 140 samples, becoming the largest RNA sequencing data set for differential expression studies of AAAs. We performed differential expression analyses and analyses of differential splicing between dilated and nondilated aortic tissue samples, and between AAAs of different diameters. We identified 3002 differentially expressed genes between AAAs and controls that were independent of ischemic time, 1425 of which were new. Additionally, 8 genes (, , , , , , , ) were differentially expressed between AAAs of varying diameters and between AAAs and control samples. Finally, 7 genes (, , , , , , ) with differential splicing patterns were also differentially expressed genes between AAAs and controls, suggesting that splicing differences in these genes may contribute to the observed expression changes and disease development.

CONCLUSIONS

This study identifies new genes and splicing patterns associated with AAAs and validates previous relevant pathways on AAAs. These findings contribute to the understanding of the complex mechanisms underlying AAAs and may provide potential targets to limit AAA progression and mortality risk.

摘要

背景

腹主动脉瘤(AAA)是腹主动脉的局限性扩张,其会逐渐扩大,增加破裂风险。AAA破裂与高死亡率相关,但AAA起始、扩张和破裂的潜在机制尚未完全明确。我们旨在描述AAA的病理生理学特征,并鉴定与AAA起始和进展相关的新基因。

方法与结果

本研究使用了140个样本的RNA测序数据,成为AAA差异表达研究中最大的RNA测序数据集。我们对扩张和未扩张的主动脉组织样本之间,以及不同直径的AAA之间进行了差异表达分析和差异剪接分析。我们在AAA与对照之间鉴定出3002个独立于缺血时间的差异表达基因,其中1425个是新发现的。此外,8个基因(,,,,,,,)在不同直径的AAA之间以及AAA与对照样本之间存在差异表达。最后,7个具有差异剪接模式的基因(,,,,,,)也是AAA与对照之间的差异表达基因,这表明这些基因的剪接差异可能导致了观察到的表达变化和疾病发展。

结论

本研究鉴定出与AAA相关的新基因和剪接模式,并验证了先前关于AAA的相关通路。这些发现有助于理解AAA潜在的复杂机制,并可能提供限制AAA进展和死亡风险的潜在靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec55/11935534/9075913afe5e/JAH3-13-e036082-g003.jpg

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