Xiao Yu, Lv Yan-Wen, Wang Zi-Yun, Wu Chao, He Zi-Han, Hu Xin-Sheng
College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China.
Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, South China Agricultural University, Guangzhou 510642, China.
Genome Biol Evol. 2024 Dec 4;16(12). doi: 10.1093/gbe/evae261.
Sexual reproduction with alternative generations in a life cycle is an important feature in eukaryotic evolution. Partial selfing can regulate the efficacy of purging deleterious alleles in the gametophyte phase and the masking effect in heterozygotes in the sporophyte phase. Here, we develop a new theory to analyze how selfing shapes fixation of a mutant allele that is expressed in the gametophyte or the sporophyte phase only or in two phases. In an infinitely large population, we analyze a critical selfing rate beyond which the mutant allele tends to be fixed under equilibrium between irreversible mutation and selection effects. The critical selfing rate varies with genes expressed in alternative phases. In a finite population with partial self-fertilization, we apply Wright's method to calculate the fixation probability of the mutant allele under flux equilibrium among irreversible mutation, selection, and drift effects and compare it with the fixation probability derived from diffusion model under equilibrium between selection and drift effects. Selfing facilitates fixation of the deleterious allele expressed in the gametophyte phase only but impedes fixation of the deleterious allele expressed in the sporophyte phase only. Selfing facilitates or impedes fixation of the deleterious allele expressed in two phases, depending upon how phase variation in selection occurs in a life cycle. The overall results help to understand the adaptive strategy that sexual reproductive plant species evolve through the joint effects of partial selfing and alternative generations in a life cycle.
在生命周期中具有世代交替的有性生殖是真核生物进化的一个重要特征。部分自交可以调节在配子体阶段清除有害等位基因的效率以及在孢子体阶段杂合子中的掩盖效应。在这里,我们提出一种新理论来分析自交如何影响仅在配子体阶段或孢子体阶段或在两个阶段中表达的突变等位基因的固定。在一个无限大的种群中,我们分析一个临界自交率,超过这个临界值,突变等位基因在不可逆突变和选择效应之间的平衡下趋于固定。临界自交率随在交替阶段表达的基因而变化。在一个具有部分自交的有限种群中,我们应用赖特方法来计算在不可逆突变、选择和漂变效应的通量平衡下突变等位基因的固定概率,并将其与在选择和漂变效应之间的平衡下从扩散模型推导的固定概率进行比较。自交促进仅在配子体阶段表达的有害等位基因的固定,但阻碍仅在孢子体阶段表达的有害等位基因的固定。自交促进或阻碍在两个阶段中表达的有害等位基因的固定,这取决于在生命周期中选择的阶段变化是如何发生的。总体结果有助于理解有性生殖植物物种通过部分自交和生命周期中的世代交替的联合效应所进化出的适应性策略。