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从巴基斯坦污水中分离出的携带超广谱β-内酰胺酶基因的ST7366菌株的全基因组序列。

Complete genome sequence of an ST7366 strain harboring an extended-spectrum β-lactamase gene isolated from sewage water in Pakistan.

作者信息

Lee Jung Hun, Yasmin Saba, Kim Nam-Hoon, Jeong Chanyeong, Kang Byeonghyeon, Lee Gwangje, Kim Dae-Wi, Zahra Rabaab, Lee Sang Hee

机构信息

National Leading Research Laboratory of Drug Resistance Proteomics, Department of Biological Sciences, Myongji University, Yongin, South Korea.

Department of Microbiology, Quaid-i-Azam University, Islamabad, Pakistan.

出版信息

Microbiol Resour Announc. 2025 Jan 16;14(1):e0079324. doi: 10.1128/mra.00793-24. Epub 2024 Dec 12.

DOI:10.1128/mra.00793-24
PMID:39665564
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11737184/
Abstract

We announce the complete genome of strain PEC1003 belonging to ST7366, isolated from sewage water in Pakistan. This strain harbored a plasmid carrying various antibiotic resistance genes, including extended-spectrum β-lactamase (ESBL), , emphasizing the management and surveillance of ESBL-producing in the environment of developing countries.

摘要

我们公布了属于ST7366的PEC1003菌株的全基因组,该菌株是从巴基斯坦的污水中分离出来的。该菌株携带一个质粒,其上带有多种抗生素抗性基因,包括超广谱β-内酰胺酶(ESBL),这凸显了在发展中国家环境中对产ESBL细菌的管理和监测。

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本文引用的文献

1
CARD 2023: expanded curation, support for machine learning, and resistome prediction at the Comprehensive Antibiotic Resistance Database.CARD 2023:在全面抗生素耐药性数据库中进行扩展的策展、对机器学习的支持以及耐药组预测。
Nucleic Acids Res. 2023 Jan 6;51(D1):D690-D699. doi: 10.1093/nar/gkac920.
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Antibiotic resistance pattern and molecular detection of ESBL-associated genes in E. coli from surface and wastewater of Islamabad capital territory, Pakistan.巴基斯坦伊斯兰堡首都地区地表水和废水中大肠杆菌的抗生素耐药模式及超广谱β-内酰胺酶相关基因的分子检测
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4
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Wellcome Open Res. 2018 Sep 24;3:124. doi: 10.12688/wellcomeopenres.14826.1. eCollection 2018.
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ClermonTyping: an easy-to-use and accurate in silico method for Escherichia genus strain phylotyping.ClermonTyping:一种用于肠杆菌属菌株分群的易于使用且准确的计算方法。
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Development of a Web Tool for Escherichia coli Subtyping Based on Alleles.基于等位基因的大肠杆菌亚型分型网络工具的开发
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Recent advances in understanding enteric pathogenic Escherichia coli.对肠致病性大肠杆菌的认识的最新进展。
Clin Microbiol Rev. 2013 Oct;26(4):822-80. doi: 10.1128/CMR.00022-13.
8
Clinical significance of extended-spectrum beta-lactamases.超广谱β-内酰胺酶的临床意义
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