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热量限制长期效应综合评估(CALERIE)基因组数据资源

The CALERIE Genomic Data Resource.

作者信息

Ryan C P, Corcoran D L, Banskota N, Eckstein Indik C, Floratos A, Friedman R, Kobor M S, Kraus V B, Kraus W E, MacIsaac J L, Orenduff M C, Pieper C F, White J P, Ferrucci L, Horvath S, Huffman K M, Belsky D W

机构信息

Robert N. Butler Columbia Aging Center, Columbia University Mailman School of Public Health, New York, NY, USA.

Department of Genetics, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.

出版信息

Nat Aging. 2025 Feb;5(2):320-331. doi: 10.1038/s43587-024-00775-0. Epub 2024 Dec 13.

Abstract

Caloric restriction (CR) slows biological aging and prolongs healthy lifespan in model organisms. Findings from the CALERIE randomized, controlled trial of long-term CR in healthy, nonobese humans broadly supports a similar pattern of effects in humans. To expand our understanding of the molecular pathways and biological processes underpinning CR effects in humans, we generated a series of genomic datasets from stored biospecimens collected from n = 218 participants during the trial. These data constitute a genomic data resource for a randomized controlled trial of an intervention targeting the biology of aging. Datasets include whole-genome single-nucleotide polymorphism genotypes, and three-timepoint-longitudinal DNA methylation, mRNA and small RNA datasets generated from blood, skeletal muscle and adipose tissue samples (total sample n = 2,327). The CALERIE Genomic Data Resource described in this article is available from the Aging Research Biobank. This multi-tissue, multi-omics, longitudinal data resource has great potential to advance translational geroscience. ClinicalTrials.gov registration: NCT00427193 .

摘要

热量限制(CR)可减缓模式生物的生物衰老并延长其健康寿命。CALERIE针对健康非肥胖人群进行的长期CR随机对照试验结果广泛支持了人类中类似的效应模式。为了扩展我们对CR在人类中产生效应的分子途径和生物过程的理解,我们从试验期间收集的n = 218名参与者的储存生物样本中生成了一系列基因组数据集。这些数据构成了一项针对衰老生物学干预措施的随机对照试验的基因组数据资源。数据集包括全基因组单核苷酸多态性基因型,以及从血液、骨骼肌和脂肪组织样本中生成的三个时间点的纵向DNA甲基化、mRNA和小RNA数据集(总样本n = 2327)。本文所述的CALERIE基因组数据资源可从衰老研究生物样本库获取。这种多组织、多组学的纵向数据资源在推进转化老年科学方面具有巨大潜力。ClinicalTrials.gov注册号:NCT00427193 。

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