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人线粒体核糖体中三个[2Fe-2S]簇的关键作用及保守性

Crucial role and conservation of the three [2Fe-2S] clusters in the human mitochondrial ribosome.

作者信息

Boß Linda, Stehling Oliver, Elsässer Hans-Peter, Lill Roland

机构信息

Institut für Zytobiologie im Zentrum für Synthetische Mikrobiologie SynMikro, Philipps-Universität Marburg, Marburg, Germany.

Institut für Zytobiologie im Zentrum für Synthetische Mikrobiologie SynMikro, Philipps-Universität Marburg, Marburg, Germany.

出版信息

J Biol Chem. 2025 Feb;301(2):108087. doi: 10.1016/j.jbc.2024.108087. Epub 2024 Dec 13.

Abstract

Mitochondria synthesize only a small set of their proteins on endogenous mitoribosomes. These particles differ in structure and composition from both their bacterial 70S ancestors and cytosolic 80S ribosomes. Recently published high resolution structures of the human mitoribosome revealed the presence of three [2Fe-2S] clusters in the small and large subunits. Each of these clusters is coordinated in a bridging fashion by cysteine residues from two different mitoribosomal proteins. Here, we investigated the cell biological and biochemical roles of all three iron-sulfur clusters in mitochondrial function and assembly. First, we found a requirement of both early and late factors of the mitochondrial iron-sulfur cluster assembly machinery for protein translation indicating that not only the mitoribosome [2Fe-2S] clusters but also the [4Fe-4S] cluster of the mitoribosome assembly factor METTL17 are required for mitochondrial translation. Second, siRNA-mediated depletion of the cluster-coordinating ribosomal proteins bS18m, mS25, or mL66 and complementation with either the respective WT or cysteine-exchange proteins unveiled the importance of the clusters for assembly, stability, and function of the human mitoribosome. As a consequence, the lack of cluster binding to mitoribosomes impaired the activity of the mitochondrial respiratory chain complexes and led to altered mitochondrial morphology with a loss of cristae membranes. Finally, in silico investigation of the phylogenetic distribution of the cluster-coordinating cysteine motifs indicated their presence in most metazoan mitoribosomes, with exception of ray-finned fish. Collectively, our study highlights the functional need of mitochondrial iron-sulfur protein biogenesis for both protein translation and respiratory energy supply in most metazoan mitochondria.

摘要

线粒体仅在内源线粒体核糖体上合成一小部分自身蛋白质。这些颗粒在结构和组成上与它们的细菌70S祖先以及胞质80S核糖体均有所不同。最近发表的人类线粒体核糖体的高分辨率结构揭示了小亚基和大亚基中存在三个[2Fe-2S]簇。每个簇都由来自两种不同线粒体核糖体蛋白的半胱氨酸残基以桥接方式配位。在此,我们研究了所有三个铁硫簇在线粒体功能和组装中的细胞生物学和生化作用。首先,我们发现线粒体铁硫簇组装机制的早期和晚期因子对于蛋白质翻译都是必需的,这表明不仅线粒体核糖体的[2Fe-2S]簇,而且线粒体核糖体组装因子METTL17的[4Fe-4S]簇对于线粒体翻译都是必需的。其次,通过siRNA介导的方式耗尽簇配位核糖体蛋白bS18m、mS25或mL66,并分别用各自的野生型或半胱氨酸交换蛋白进行互补,揭示了这些簇对于人类线粒体核糖体组装、稳定性和功能的重要性。结果,簇与线粒体核糖体的结合缺失损害了线粒体呼吸链复合物的活性,并导致线粒体形态改变,嵴膜丢失。最后,对簇配位半胱氨酸基序的系统发育分布进行的计算机模拟研究表明,它们存在于大多数后生动物的线粒体核糖体中,但辐鳍鱼除外。总的来说,我们的研究强调了线粒体铁硫蛋白生物合成对于大多数后生动物线粒体中蛋白质翻译和呼吸能量供应的功能需求。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db3e/11791143/ddfd409bb407/gr1.jpg

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