Lavdovskaia Elena, Hanitsch Elisa, Linden Andreas, Pašen Martin, Challa Venkatapathi, Horokhovskyi Yehor, Roetschke Hanna P, Nadler Franziska, Welp Luisa, Steube Emely, Heinrichs Marleen, Mai Mandy Mong-Quyen, Urlaub Henning, Liepe Juliane, Richter-Dennerlein Ricarda
Department of Molecular Biology, University Medical Center Göttingen, Göttingen, Germany.
Department of Cellular Biochemistry, University Medical Center Göttingen, Göttingen, Germany.
Nat Struct Mol Biol. 2024 Dec;31(12):1898-1908. doi: 10.1038/s41594-024-01356-w. Epub 2024 Jul 11.
Mitochondria contain dedicated ribosomes (mitoribosomes), which synthesize the mitochondrial-encoded core components of the oxidative phosphorylation complexes. The RNA and protein components of mitoribosomes are encoded on two different genomes (mitochondrial and nuclear) and are assembled into functional complexes with the help of dedicated factors inside the organelle. Defects in mitoribosome biogenesis are associated with severe human diseases, yet the molecular pathway of mitoribosome assembly remains poorly understood. Here, we applied a multidisciplinary approach combining biochemical isolation and analysis of native mitoribosomal assembly complexes with quantitative mass spectrometry and mathematical modeling to reconstitute the entire assembly pathway of the human mitoribosome. We show that, in contrast to its bacterial and cytosolic counterparts, human mitoribosome biogenesis involves the formation of ribosomal protein-only modules, which then assemble on the appropriate ribosomal RNA moiety in a coordinated fashion. The presence of excess protein-only modules primed for assembly rationalizes how mitochondria cope with the challenge of forming a protein-rich ribonucleoprotein complex of dual genetic origin. This study provides a comprehensive roadmap of mitoribosome biogenesis, from very early to late maturation steps, and highlights the evolutionary divergence from its bacterial ancestor.
线粒体含有专用核糖体(线粒体核糖体),其合成氧化磷酸化复合物的线粒体编码核心成分。线粒体核糖体的RNA和蛋白质成分由两个不同的基因组(线粒体和细胞核)编码,并在细胞器内专用因子的帮助下组装成功能复合物。线粒体核糖体生物发生缺陷与严重人类疾病相关,但线粒体核糖体组装的分子途径仍知之甚少。在这里,我们应用了一种多学科方法,将天然线粒体核糖体组装复合物的生化分离和分析与定量质谱和数学建模相结合,以重建人类线粒体核糖体的整个组装途径。我们表明,与细菌和胞质核糖体不同,人类线粒体核糖体生物发生涉及仅由核糖体蛋白组成的模块的形成,然后这些模块以协调的方式组装在适当的核糖体RNA部分上。存在准备组装的过量仅由蛋白质组成的模块,解释了线粒体如何应对形成具有双重遗传起源的富含蛋白质的核糖核蛋白复合物的挑战。这项研究提供了从非常早期到晚期成熟步骤的线粒体核糖体生物发生的全面路线图,并突出了与其细菌祖先的进化差异。