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线粒体相关耐药性长链非编码RNA作为喉鳞状细胞癌的预后生物标志物

Mitochondrial-related drug resistance lncRNAs as prognostic biomarkers in laryngeal squamous cell carcinoma.

作者信息

Wu Zhimin, Chen Yi, Jiang Dizhi, Pan Yipeng, Tang Tuoxian, Ma Yifei, Shapaer Tiannake

机构信息

Department of Otorhinolaryngology Head and Neck Surgery, The Maternal and Child Health Care Hospital of Guizhou Medical University, Guiyang, 550000, Guizhou, China.

Department of Otorhinolaryngology Head and Neck Surgery, Affiliated Hospital of Guizhou Medical University, Guiyang, 550003, Guizhou, China.

出版信息

Discov Oncol. 2024 Dec 18;15(1):785. doi: 10.1007/s12672-024-01690-x.

DOI:10.1007/s12672-024-01690-x
PMID:39692950
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11655928/
Abstract

Laryngeal squamous cell carcinoma (LSCC) is a common malignant tumor of the head and neck that significantly impacts patients' quality of life, with chemotherapy resistance notably affecting prognosis. This study aims to identify prognostic biomarkers to optimize treatment strategies for LSCC. Using data from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO), combined with mitochondrial gene database analysis, we identified mitochondrial lncRNAs associated with drug resistance genes. Key long non-coding RNAs (lncRNAs) were selected through univariate Cox regression and Lasso regression, and a multivariate Cox regression model was constructed to predict prognosis. We further analyzed the differences in immune function and biological pathway enrichment between high- and low-risk groups, developed a nomogram, and compared drug sensitivity. Results showed that the prognostic model based on seven mitochondrial lncRNAs could serve as an independent prognostic factor, with Area Under the Curve (AUC) values of 0.746, 0.827, and 0.771 at 1, 3, and 5 years, respectively, outperforming some existing models, demonstrating high predictive performance. Significant differences were observed in immune function and drug sensitivity between the high- and low-risk groups. The risk prediction model incorporating seven drug resistance-related mitochondrial lncRNAs can accurately and independently predict the prognosis of LSCC patients.

摘要

喉鳞状细胞癌(LSCC)是一种常见的头颈部恶性肿瘤,严重影响患者的生活质量,化疗耐药性对预后影响显著。本研究旨在确定预后生物标志物,以优化LSCC的治疗策略。利用来自癌症基因组图谱(TCGA)和基因表达综合数据库(GEO)的数据,并结合线粒体基因数据库分析,我们鉴定出了与耐药基因相关的线粒体长链非编码RNA(lncRNA)。通过单变量Cox回归和Lasso回归筛选关键长链非编码RNA,并构建多变量Cox回归模型来预测预后。我们进一步分析了高风险组和低风险组之间免疫功能和生物通路富集的差异,绘制了列线图,并比较了药物敏感性。结果表明,基于七种线粒体lncRNA的预后模型可作为独立的预后因素,1年、3年和5年的曲线下面积(AUC)值分别为0.746、0.827和0.771,优于一些现有模型,显示出较高的预测性能。高风险组和低风险组之间在免疫功能和药物敏感性方面存在显著差异。纳入七种与耐药相关的线粒体lncRNA的风险预测模型能够准确、独立地预测LSCC患者的预后。

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