Shapaer Tiannake, Chen Yi, Pan Yipeng, Wu Zhimin, Tang Tuoxian, Zhao Zeliang, Zeng Xiangyue
Department of Gastrointestinal Surgery, The Affiliated Cancer Hospital of Xinjiang Medical University, Urumqi, 830011, Xinjiang Uygur Autonomous Region, China.
Department of Breast and Thyroid Surgery, The Affiliated Cancer Hospital of Xinjiang Medical University, Urumqi, 830011, Xinjiang Uygur Autonomous Region, China.
Discov Oncol. 2024 Sep 14;15(1):446. doi: 10.1007/s12672-024-01321-5.
The BEAN1 gene, primarily studied in neurodegenerative diseases, has been scarcely studied in the context of cancers. Our research examines BEAN1 expression specifically in rectal adenocarcinoma (READ) and its association with prognosis, immune evasion, and chemotherapy resistance.
Data from TCGA and GEO were analyzed to assess BEAN1 levels across various cancer types, with particular emphasis on READ. Functional enrichment, immune infiltration, and treatment response analyses were conducted, followed by validation using patient tissue samples.
READ tissues exhibited a marked increase in BEAN1 expression compared to normal tissues. Elevated BEAN1 levels were associated with reduced overall survival and increased immune suppression, characterized by elevated M2 macrophage infiltration and reduced CD8+ T cell presence. BEAN1 expression was also linked to higher immune checkpoint genes expression and resistance to immune checkpoint inhibitors and 5-fluorouracil.
This research offers initial evidence that BEAN1 is linked to unfavorable prognosis, immune escape, and resistance to chemotherapy in READ. BEAN1 appears to be a promising new biomarker and potential therapeutic target, warranting further investigation into its potential clinical applications in improving treatment outcomes for READ patients.
BEAN1基因主要在神经退行性疾病中进行研究,在癌症背景下的研究很少。我们的研究专门检测BEAN1在直肠腺癌(READ)中的表达及其与预后、免疫逃逸和化疗耐药性的关系。
分析来自TCGA和GEO的数据,以评估BEAN1在各种癌症类型中的水平,特别关注READ。进行了功能富集、免疫浸润和治疗反应分析,随后使用患者组织样本进行验证。
与正常组织相比,READ组织中BEAN1表达显著增加。BEAN1水平升高与总生存期缩短和免疫抑制增加相关,其特征是M2巨噬细胞浸润增加和CD8+T细胞存在减少。BEAN1表达还与更高的免疫检查点基因表达以及对免疫检查点抑制剂和5-氟尿嘧啶的耐药性有关。
本研究提供了初步证据,表明BEAN1与READ的不良预后、免疫逃逸和化疗耐药性有关。BEAN1似乎是一个有前景的新生物标志物和潜在治疗靶点,值得进一步研究其在改善READ患者治疗结果方面的潜在临床应用。