Subramanian Sundharraman, Bergland Drarvik Silje M, Tinney Kendal R, Doore Sarah M, Parent Kristin N
Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI 48824, USA.
Department of Integrative Biology, Michigan State University, East Lansing, MI 48824, USA.
Sci Adv. 2024 Dec 20;10(51):eadt0022. doi: 10.1126/sciadv.adt0022. Epub 2024 Dec 18.
Podophages are, by far, the least well studied of all the bacteriophages. Despite being classified together due to their short, noncontractile tails, there is a huge amount of diversity among members of this group. Of the podophages, the N4-like family is the least well studied structurally and is quite divergent from well-characterized podophages such as T7 and P22. In this work, we isolate and fully characterize two members of the family by cryo-electron microscopy, genetics, and biochemistry. We describe the capsid features of Moo19 and B2, including a decoration protein. In addition, we have fully modeled the tail machinery for both phages and identify proteins with esterase activity. Genetic knockouts of the host reveal factors specific for host attachment including key modifications to the O-antigen on the lipopolysaccharide. Moo19 and B2 are both members, yet some distinct differences in the genome and structure place them into distinct clades.
到目前为止,短尾噬菌体是所有噬菌体中研究最少的。尽管由于它们短而不可收缩的尾部而被归为一类,但该类成员之间存在着巨大的多样性。在短尾噬菌体中,N4样家族在结构上研究最少,并且与特征明确的短尾噬菌体如T7和P22有很大差异。在这项工作中,我们通过冷冻电子显微镜、遗传学和生物化学方法分离并全面表征了该家族的两个成员。我们描述了Moo19和B2的衣壳特征,包括一种装饰蛋白。此外,我们对这两种噬菌体的尾部机制进行了完整建模,并鉴定出具有酯酶活性的蛋白质。宿主的基因敲除揭示了宿主附着所特有的因素,包括脂多糖上O抗原的关键修饰。Moo19和B2都是该家族的成员,但基因组和结构上的一些明显差异使它们归入不同的进化枝。