Song Seongeun, Rhee Sangmyung
Department of Life Science, Chung-Ang University, Seoul, 06974, Republic of Korea.
Genes Genomics. 2025 Mar;47(3):331-340. doi: 10.1007/s13258-024-01606-7. Epub 2024 Dec 20.
Epidermal growth factor receptor-tyrosine kinase inhibitors (EGFR-TKIs) are standard treatments for non-small cell lung cancer (NSCLC) patients with EGFR mutations; however, drug resistance limits their efficacy. Cytoskeleton-associated protein 4 (CKAP4) has been linked to cancer progression, but its role in EGFR-TKI resistance remains unclear.
This study investigates the clinical relevance of CKAP4 as a therapeutic target to overcome EGFR-TKI resistance in lung adenocarcinoma (LUAD) patients.
GEO datasets were analyzed to identify 24 differentially expressed genes associated with EGFR-TKI resistance, with CKAP4 selected via functional annotation and scoring using the VarElect tool. The prognostic significance of CKAP4 was evaluated using public databases, and its upregulation was confirmed in osimertinib-tolerant H1975 cells through quantitative reverse transcription-polymerase chain reaction.
Integrated bioinformatics analysis identified CKAP4 as strongly associated with EGFR-TKI resistance. Elevated CKAP4 expression was particularly linked to poorer clinical outcomes in LUAD patients. Notably, osimertinib-tolerant cells exhibited high CKAP4 expression, correlating positively with increased half-maximal inhibitory concentrations of EGFR-TKIs. LUAD patients with upregulated CKAP4 showed significantly reduced overall and relapse-free survival.
This study underscores the prognostic value of CKAP4 in EGFR-mutated LUAD and highlights its potential as a therapeutic target to counter EGFR-TKI resistance.
表皮生长因子受体酪氨酸激酶抑制剂(EGFR-TKIs)是治疗表皮生长因子受体(EGFR)突变的非小细胞肺癌(NSCLC)患者的标准疗法;然而,耐药性限制了它们的疗效。细胞骨架相关蛋白4(CKAP4)与癌症进展有关,但其在EGFR-TKI耐药中的作用仍不清楚。
本研究调查CKAP4作为克服肺腺癌(LUAD)患者EGFR-TKI耐药的治疗靶点的临床相关性。
分析基因表达综合数据库(GEO)数据集,以鉴定与EGFR-TKI耐药相关的24个差异表达基因,通过使用VarElect工具进行功能注释和评分选择CKAP4。使用公共数据库评估CKAP4的预后意义,并通过定量逆转录-聚合酶链反应在奥希替尼耐受的H1975细胞中证实其上调。
综合生物信息学分析确定CKAP4与EGFR-TKI耐药密切相关。CKAP4表达升高尤其与LUAD患者较差的临床结局相关。值得注意的是,奥希替尼耐受细胞表现出高CKAP4表达,与EGFR-TKIs的半数最大抑制浓度增加呈正相关。CKAP4上调的LUAD患者的总生存期和无复发生存期显著缩短。
本研究强调了CKAP4在EGFR突变的LUAD中的预后价值,并突出了其作为对抗EGFR-TKI耐药的治疗靶点的潜力。