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具有知识蒸馏的用于医学数据的强大多模态融合架构

Robust multi-modal fusion architecture for medical data with knowledge distillation.

作者信息

Wang Muyu, Fan Shiyu, Li Yichen, Gao Binyu, Xie Zhongrang, Chen Hui

机构信息

School of Biomedical Engineering, Capital Medical University, No.10, Xitoutiao, You An Men, Fengtai District, Beijing 100069, China; Beijing Key Laboratory of Fundamental Research on Biomechanics in Clinical Application, Capital Medical University, No.10, Xitoutiao, You An Men, Fengtai District, Beijing 100069, China.

School of Biomedical Engineering, Capital Medical University, No.10, Xitoutiao, You An Men, Fengtai District, Beijing 100069, China; Beijing Key Laboratory of Fundamental Research on Biomechanics in Clinical Application, Capital Medical University, No.10, Xitoutiao, You An Men, Fengtai District, Beijing 100069, China.

出版信息

Comput Methods Programs Biomed. 2025 Mar;260:108568. doi: 10.1016/j.cmpb.2024.108568. Epub 2024 Dec 18.

Abstract

BACKGROUND

The fusion of multi-modal data has been shown to significantly enhance the performance of deep learning models, particularly on medical data. However, missing modalities are common in medical data due to patient specificity, which poses a substantial challenge to the application of these models.

OBJECTIVE

This study aimed to develop a novel and efficient multi-modal fusion framework for medical datasets that maintains consistent performance, even in the absence of one or more modalities.

METHODS

In this paper, we fused three modalities: chest X-ray radiographs, history of present illness text, and tabular data such as demographics and laboratory tests. A multi-modal fusion module based on pooled bottleneck (PB) attention was proposed in conjunction with knowledge distillation (KD) for enhancing model inference in the case of missing modalities. In addition, we introduced a gradient modulation (GM) method to deal with the unbalanced optimization in multi-modal model training. Finally, we designed comparison and ablation experiments to evaluate the fusion effect, the model robustness to missing modalities, and the contribution of each component (PB, KD, and GM). The evaluation experiments were performed on the MIMIC-IV datasets with the task of predicting in-hospital mortality risk. Model performance was assessed using the area under the receiver operating characteristic curve (AUROC) and the area under the precision-recall curve (AUPRC).

RESULTS

The proposed multi-modal fusion framework achieved an AUROC of 0.886 and AUPRC of 0.459, significantly surpassing the performance of baseline models. Even when one or two modalities were missing, our model consistently outperformed the reference models. Ablation of each of the three components resulted in varying degrees of performance degradation, highlighting their distinct contributions to the model's overall effectiveness.

CONCLUSIONS

This innovative multi-modal fusion architecture has demonstrated robustness to missing modalities, and has shown excellent performance in fusing three medical modalities for patient outcome prediction. This study provides a novel idea for addressing the challenge of missing modalities and has the potential be scaled to additional modalities.

摘要

背景

多模态数据融合已被证明能显著提高深度学习模型的性能,尤其是在医学数据方面。然而,由于患者的特殊性,医学数据中缺失模态的情况很常见,这给这些模型的应用带来了巨大挑战。

目的

本研究旨在为医学数据集开发一种新颖且高效的多模态融合框架,即使在缺少一种或多种模态的情况下,也能保持一致的性能。

方法

在本文中,我们融合了三种模态:胸部X光片、现病史文本以及诸如人口统计学和实验室检查等表格数据。提出了一种基于池化瓶颈(PB)注意力的多模态融合模块,并结合知识蒸馏(KD)来增强在缺少模态情况下的模型推理。此外,我们引入了一种梯度调制(GM)方法来处理多模态模型训练中的不平衡优化问题。最后,我们设计了对比和消融实验来评估融合效果、模型对缺失模态的鲁棒性以及每个组件(PB、KD和GM)的贡献。评估实验在MIMIC-IV数据集上进行,任务是预测住院死亡率风险。使用受试者工作特征曲线下面积(AUROC)和精确召回率曲线下面积(AUPRC)评估模型性能。

结果

所提出的多模态融合框架实现了0.886的AUROC和0.459的AUPRC,显著超过了基线模型的性能。即使缺少一种或两种模态,我们的模型也始终优于参考模型。对三个组件中的每一个进行消融都会导致不同程度的性能下降,突出了它们对模型整体有效性的不同贡献。

结论

这种创新的多模态融合架构已证明对缺失模态具有鲁棒性,并在融合三种医学模态以预测患者预后方面表现出优异的性能。本研究为解决缺失模态的挑战提供了一个新思路,并且有可能扩展到更多模态。

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