Hong Pei-Ying, Mathieu Jacques, Cheng Hong, Narayanasamy Shaman, Castillo Darwin A, Goel Ramesh, Alvarez Pedro Jj
Environmental Science and Engineering Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia.
Sentinel Environmental, Houston, Texas 77082, United States; Department of Civil and Environmental Engineering, and Rice Water Institute, Rice University, Houston, Texas 77005, United States.
Curr Opin Biotechnol. 2025 Feb;91:103242. doi: 10.1016/j.copbio.2024.103242. Epub 2024 Dec 21.
While the use of phages in the food and biomedical sectors occurs commercially, their application in the water sector is less common and is typically demonstrated at a lower technological readiness level. This is so despite the potential that phages have to enhance the control of problematic bacteria (including pathogens) and protect infrastructure within the water sector. Fulfilling the great potential of this nascent field requires more research and development. Here, we highlight innovation opportunities and discern critical knowledge gaps and research needs to facilitate the use of phages as precise biocontrol agents in the water sector. First, while the advent of sequencing technologies made it easier to identify bacterial communities and understand their functional roles, identifying and cultivating the appropriate phages that can be effective against the bacterial target requires more research. The large volumes of water to be spiked with phages also require optimizing the phage biocontrol strategy, minimizing the associated costs and enhancing scaling up. In addition, bacterial hosts may gain phage resistance after long-term exposure, which is common in most water-engineered systems, and strategies to minimize or delay resistance must be considered. In this opinion, we provide an overview of pertinent literature and bioinformatic tools that help identify appropriate bacterial hosts and phages for water systems applications. We then discuss strategies that can aid in prolonging the efficacy and enhancing the feasibility of phage biocontrol approaches.
虽然噬菌体在食品和生物医学领域的应用已商业化,但它们在水领域的应用却不太常见,而且技术成熟度通常较低。尽管噬菌体有潜力加强对有问题细菌(包括病原体)的控制并保护水领域的基础设施,但情况依然如此。要实现这个新兴领域的巨大潜力,还需要更多的研发工作。在此,我们重点介绍创新机会,识别关键的知识空白和研究需求,以促进噬菌体在水领域作为精确生物控制剂的使用。首先,虽然测序技术的出现使识别细菌群落并了解其功能作用变得更加容易,但识别和培养能够有效对抗细菌目标的合适噬菌体还需要更多研究。大量需要接种噬菌体的水也需要优化噬菌体生物控制策略,将相关成本降至最低并扩大规模。此外,细菌宿主在长期接触后可能会产生噬菌体抗性,这在大多数水工程系统中很常见,因此必须考虑尽量减少或延缓抗性的策略。在本观点中,我们概述了有助于识别适用于水系统应用的合适细菌宿主和噬菌体的相关文献和生物信息学工具。然后,我们讨论了有助于延长噬菌体生物控制方法的有效性并提高其可行性的策略。