Villar-Álvarez David, Navarro José A, Pallas Vicente, Sanchez-Navarro Jesús Ángel
Instituto de Biología Molecular y Celular de Plantas (IBMCP), Universitat Politècnica de Valencia-Consejo Superior de Investigaciones Científicas, Valencia, Spain.
Biotechnol J. 2024 Dec;19(12):e202400584. doi: 10.1002/biot.202400584.
Virus-induced gene silencing (VIGS) represents a particularly relevant tool in agricultural species for studying gene functionality. This study presents a novel approach for utilizing viruses belonging to the 30K family of movement proteins (MPs) as VIGS vectors. The method described here employs smaller inserts (54 bp or less) than those commonly used (100-500 bp). The developed strategy involves modifying 30K family MPs to introduce heterologous sequences of the gene of interest into their coding sequence. This approach enabled the successful induction of gene silencing in Nicotiana tabacum and Nicotiana benthamiana. Three representative viruses of the MP 30K family, alfalfa mosaic virus (AMV), cucumber mosaic virus (CMV), and tobacco mosaic virus (TMV) were employed. The capacity to induce gene silencing of small inserts (18-54 bp) was investigated, enabling to establish a correlation between insert size and silencing efficacy. This allowed the system to be calibrated to achieve partial silencing levels. The relationship between viral encapsidation and the level of gene silencing was also investigated, revealing that a high efficiency of viral encapsidation results in a reduction in the level of gene silencing achieved. Considering these findings, it can be concluded that the approach carried out with AMV, CMV, and TMV could be applied to other members of the MP 30K family. The MP 30K family comprises 20 viral genera and over 500 viral species, which can infect all agronomically significant plant species. Consequently, the strategy presented in this work could be applied to a wide range of relevant hosts.
病毒诱导的基因沉默(VIGS)是研究农业物种基因功能的一种特别重要的工具。本研究提出了一种利用属于30K运动蛋白(MP)家族的病毒作为VIGS载体的新方法。这里描述的方法使用的插入片段(54 bp或更小)比常用的(100 - 500 bp)更小。所开发的策略包括对30K家族MP进行修饰,将感兴趣基因的异源序列引入其编码序列。这种方法成功地在烟草和本氏烟草中诱导了基因沉默。使用了MP 30K家族的三种代表性病毒,即苜蓿花叶病毒(AMV)、黄瓜花叶病毒(CMV)和烟草花叶病毒(TMV)。研究了诱导小插入片段(18 - 54 bp)基因沉默的能力,从而能够建立插入片段大小与沉默效率之间的相关性。这使得该系统能够进行校准以实现部分沉默水平。还研究了病毒包装与基因沉默水平之间的关系,结果表明高效的病毒包装会导致所实现的基因沉默水平降低。考虑到这些发现,可以得出结论,用AMV、CMV和TMV进行的方法可应用于MP 30K家族的其他成员。MP 30K家族包括20个病毒属和500多种病毒种,可感染所有具有重要农艺价值的植物物种。因此,本研究中提出的策略可应用于广泛的相关宿主。