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从采出水中分离的sp. 菌株Wilcox的基因组序列草图

Draft genome sequence of sp. strain Wilcox isolated from produced water.

作者信息

Ajagbe Damilare, Marsh William, Murdoch Robert, Fathepure Babu

机构信息

Department of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, Oklahoma, USA.

Battelle Memorial Institute, Biosciences Division, Columbus, Ohio, USA.

出版信息

Microbiol Resour Announc. 2025 Feb 11;14(2):e0099024. doi: 10.1128/mra.00990-24. Epub 2024 Dec 23.

Abstract

The draft genome sequence of sp. strain Wilcox, isolated from produced water, is presented. The genome is 3.6 Mb in size with 3,283 protein-coding genes, including genes for hydrocarbon degradation, heavy metal resistance, and adaptation to high salinity. This genome provides insights into molecular mechanisms of hydrocarbon degradation under hypersaline conditions.

摘要

本文展示了从采出水中分离出的sp.菌株威尔科克斯的基因组序列草图。该基因组大小为3.6 Mb,含有3283个蛋白质编码基因,包括烃类降解、重金属抗性和高盐适应相关基因。该基因组为深入了解高盐条件下烃类降解的分子机制提供了依据。

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Draft genome sequence of sp. strain Wilcox isolated from produced water.从采出水中分离的sp. 菌株Wilcox的基因组序列草图
Microbiol Resour Announc. 2025 Feb 11;14(2):e0099024. doi: 10.1128/mra.00990-24. Epub 2024 Dec 23.

本文引用的文献

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Trimmomatic: a flexible trimmer for Illumina sequence data.Trimmomatic:一款适用于 Illumina 测序数据的灵活修剪工具。
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
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QUAST: quality assessment tool for genome assemblies.QUAST:基因组组装质量评估工具。
Bioinformatics. 2013 Apr 15;29(8):1072-5. doi: 10.1093/bioinformatics/btt086. Epub 2013 Feb 19.

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