Grouzdev Denis S, Babich Tamara L, Sokolova Diyana S, Tourova Tatiyana P, Poltaraus Andrey B, Nazina Tamara N
Institute of Bioengineering, Research Center of Biotechnology, Russian Academy of Sciences, Moscow, Russian Federation.
Winogradsky Institute of Microbiology, Research Center of Biotechnology, Russian Academy of Sciences, Moscow, Russian Federation.
Data Brief. 2019 Jul 25;25:104319. doi: 10.1016/j.dib.2019.104319. eCollection 2019 Aug.
sp. strain JR1-6 is a Gram-negative, facultatively anaerobic, non-spore-forming, motile, rod-shaped bacterium isolated from radionuclide- and nitrate-contaminated groundwater. This bacterium reduces nitrate to N2. Strain JR1-6 has potential for removal of nitrate contamination, which is the main reason for the interest in sequencing its genome. Here, we present a set of features of sp. strain JR1-6, together with the description of its genomic sequencing and annotation. The draft genome of strain JR1-6 has a size of ∼7.09 Mb and contains 6,945 genes, including 62 RNA genes. In the genome of strain JR1-6, the genes were revealed encoding nitrate reduction to N2, as well as the genes associated with metal resistance, showing its adaptation to the conditions of the environment and possible role in nitrate removal from contaminated groundwater. The draft genome sequence of sp. strain JR1-6 is available at DDBJ/EMBL/GenBank under the accession no. SHMI00000000.
sp.菌株JR1-6是一种革兰氏阴性、兼性厌氧、不形成芽孢、具运动性的杆状细菌，从受放射性核素和硝酸盐污染的地下水中分离得到。该细菌可将硝酸盐还原为N2。菌株JR1-6具有去除硝酸盐污染的潜力，这也是对其进行基因组测序的主要原因。在此，我们展示了sp.菌株JR1-6的一系列特征，以及对其基因组测序和注释的描述。菌株JR1-6的基因组草图大小约为7.09 Mb，包含6945个基因，其中包括62个RNA基因。在菌株JR1-6的基因组中，发现了编码将硝酸盐还原为N2的基因，以及与金属抗性相关的基因，这表明其对环境条件的适应性以及在从受污染地下水中去除硝酸盐方面可能发挥的作用。sp.菌株JR1-6的基因组草图序列可在DDBJ/EMBL/GenBank上获取，登录号为SHMI00000000。
