Suppr超能文献

一种使用OpenMMPol库与Cfour之间接口的可极化CASSCF/MM方法。

A Polarizable CASSCF/MM Approach Using the Interface Between OpenMMPol Library and Cfour.

作者信息

Nottoli Tommaso, Bondanza Mattia, Lipparini Filippo, Mennucci Benedetta

机构信息

Dipartimento di Chimica e Chimica Industriale, Università di Pisa, Pisa, Italy.

出版信息

J Comput Chem. 2025 Jan 5;46(1):e27550. doi: 10.1002/jcc.27550.

Abstract

We present a polarizable embedding quantum mechanics/molecular mechanics (QM/MM) framework for ground- and excited-state Complete Active Space Self-Consistent Field (CASSCF) calculations on molecules within complex environments, such as biological systems. These environments are modeled using the AMOEBA polarizable force field. This approach is implemented by integrating the OpenMMPol library with the CFour quantum chemistry software suite. The implementation supports both single-point energy evaluations and geometry optimizations, facilitated by the availability of analytical gradients. We demonstrate the methodology by applying it to two distinct photoreceptors, exploring the impact of the protein environment on the structural and photophysical properties of their embedded chromophores.

摘要

我们提出了一种可极化嵌入量子力学/分子力学(QM/MM)框架,用于在复杂环境(如生物系统)中的分子进行基态和激发态完全活性空间自洽场(CASSCF)计算。这些环境使用AMOEBA可极化力场进行建模。该方法通过将OpenMMPol库与CFour量子化学软件套件集成来实现。由于有解析梯度,该实现支持单点能量评估和几何优化。我们通过将该方法应用于两种不同的光感受器来展示该方法,探索蛋白质环境对其嵌入发色团的结构和光物理性质的影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab8f/11668234/315ecfa16e02/JCC-46-0-g002.jpg

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验