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具有铁死亡形态的弥漫性大B细胞淋巴瘤(DLBCL)细胞可以通过深度卷积神经网络进行检测。

DLBCL cells with ferroptosis morphology can be detected with a deep convolutional neural network.

作者信息

Kotkaranta Pyry, Chan Mikko, Vuolio Tero, Miinalainen Ilkka, Kuitunen Hanne, Turpeenniemi-Hujanen Taina, Teppo Hanna-Riikka, Kuittinen Outi, Kuusisto Milla E L

机构信息

Translational Medicine Research Unit, University of Oulu, Oulu, Finland.

Translational Medicine Research Unit, University of Oulu, Oulu, Finland.

出版信息

Biomed Pharmacother. 2025 Jan;182:117785. doi: 10.1016/j.biopha.2024.117785. Epub 2024 Dec 25.

DOI:10.1016/j.biopha.2024.117785
PMID:39721323
Abstract

It has been demonstrated that diffuse large B-cell lymphoma (DLBCL) is especially sensitive to ferroptosis. Currently, confirming the presence of ferroptosis requires flow cytometry, which is a time consuming and labor-intensive task. Blistering of the cell membrane has been shown to be a ferroptosis-specific morphological change. In this study we developed a deep convolutional neural network to detect the blistering of cell membrane. Buthionine sulfoximine treatment increased the percentage of blistering cells from 2 % to 38 % (p < 0.001) when glutathione was deprived from the culture media. Ferrostatin-1 treatment completely reversed the effect. Imidazole ketone erastin (IKE) and auranofin treatment increased blistering cells gradually in dose response manner from 5.4 % to 18.1 % (p < 0.05) and 6.1-50.1 % (p < 0.0001) respectively. We also tested malignant melanoma and breast cancer cell lines to confirm that the blistering phenomena can also be observed in adherent cell lines. We used fluorescence-activated cell sorting to measure the lipid peroxidation associated with ferroptosis and found a significant increase of bodiby-C11 mean compared to DMSO controls for IKE (345 vs 462, p < 0.01) and auranofin (345 vs 686.5, p < 0.05).

摘要

已证明弥漫性大B细胞淋巴瘤(DLBCL)对铁死亡特别敏感。目前,确认铁死亡的存在需要流式细胞术,这是一项耗时且费力的任务。细胞膜起泡已被证明是铁死亡特有的形态学变化。在本研究中,我们开发了一种深度卷积神经网络来检测细胞膜的起泡。当从培养基中去除谷胱甘肽时,丁硫氨酸亚砜胺处理使起泡细胞的百分比从2%增加到38%(p<0.001)。铁抑素-1处理完全逆转了这种效应。咪唑酮厄拉司丁(IKE)和金诺芬处理分别以剂量反应方式使起泡细胞从5.4%逐渐增加到18.1%(p<0.05)和6.1%-50.1%(p<0.0001)。我们还测试了恶性黑色素瘤和乳腺癌细胞系,以确认在贴壁细胞系中也能观察到起泡现象。我们使用荧光激活细胞分选来测量与铁死亡相关的脂质过氧化,发现与DMSO对照组相比,IKE处理的bodiby-C11平均值显著增加(345对462,p<0.01),金诺芬处理的bodiby-C11平均值显著增加(345对686.5,p<0.05)。

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