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探索[具体物种1]和[具体物种2]的毒腺转录组:新毒性蛋白的从头组装与分析

Exploring the Venom Gland Transcriptome of and : De Novo Assembly and Analysis of Novel Toxic Proteins.

作者信息

Espín-Angulo Joseph, Vela Doris

机构信息

Facultad de Ciencias Exactas y Naturales, Pontificia Universidad Católica del Ecuador, Quito 170525, Ecuador.

Facultad de Ciencias Exactas y Naturales, Laboratorio de Genética Evolutiva, Pontificia Universidad Católica del Ecuador, Quito 170525, Ecuador.

出版信息

Toxins (Basel). 2024 Nov 27;16(12):511. doi: 10.3390/toxins16120511.

Abstract

Previous proteomic studies of viperid venom revealed that it is mainly composed of metalloproteinases (SVMPs), serine proteinases (SVSPs), phospholipase A2 (PLA2), and C-type lectins (CTLs). However, other proteins appear in minor amounts that affect prey and need to be identified. This study aimed to identify novel toxic proteins in the venom gland transcriptome of and , using data from NCBI. Bioinformatics tools were used to assemble, identify, and compare potentially novel proteins in both species, and we performed functional annotation with BLASTX against the NR database. While previous assemblies have been performed for , this is the first assembly of the venom gland transcriptome. Proteins with potentially novel functions were identified, including arylsulfatase and dihydroorotate dehydrogenase, among others, that could have implications for venom toxicity. These results suggest that the identified proteins may contribute to venom toxic variation and provide new opportunities for antivenom research. The study improves the understanding of the protein composition of venom and suggests new possibilities for the development of treatments and antivenoms.

摘要

先前对蝰蛇科毒液的蛋白质组学研究表明,其主要由金属蛋白酶(蛇毒金属蛋白酶,SVMPs)、丝氨酸蛋白酶(蛇毒丝氨酸蛋白酶,SVSPs)、磷脂酶A2(PLA2)和C型凝集素(CTLs)组成。然而,其他含量较少但影响猎物的蛋白质有待鉴定。本研究旨在利用来自NCBI的数据,鉴定[具体物种1]和[具体物种2]毒腺转录组中的新型有毒蛋白质。使用生物信息学工具对这两个物种中潜在的新型蛋白质进行组装、鉴定和比较,并通过BLASTX对NR数据库进行功能注释。虽然之前已经对[具体物种1]进行了组装,但这是首次对[具体物种2]毒腺转录组进行组装。鉴定出了具有潜在新功能的蛋白质,包括芳基硫酸酯酶和二氢乳清酸脱氢酶等,这些可能与毒液毒性有关。这些结果表明,所鉴定的蛋白质可能导致毒液毒性变异,并为抗蛇毒血清研究提供新的机会。该研究增进了对[具体物种2]毒液蛋白质组成的理解,并为治疗方法和抗蛇毒血清的开发提出了新的可能性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50f8/11728684/4ea907570030/toxins-16-00511-g001.jpg

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