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KDELR3过表达作为胶质瘤一种新的预后和诊断生物标志物:综合生物信息学分析见解

KDELR3 overexpression as a novel prognostic and diagnostic biomarker in glioma: comprehensive bioinformatic analysis insights.

作者信息

Feng Jing, Zhao Lin, Fu Liyuan, Wang Xinpeng, Ma Danyu, Shang Mingchao, Xu Baoqing, Zhou Jinping, Chen Zhonghua, Zhao Hu

机构信息

Department of Radiation Oncology, Fuzong Clinical Medical College of Fujian Medical University, 900TH Hospital of Joint Logistics Support Force, Fuzhou, China.

Department of Radiation Oncology, School of Medicine, Dongfang Hospital of Xiamen University, Xiamen University, 900TH Hospital of Joint Logistics Support Force, Fuzhou, China.

出版信息

Sci Rep. 2024 Dec 28;14(1):30783. doi: 10.1038/s41598-024-80991-1.

Abstract

Glioma, the most prevalent primary intracranial malignancy among adults, is distinguished by its high morbidity and recurrence rates, posing a considerable threat to patients' quality of life and survival prospects. Consequently, the pursuit of efficacious molecular prognostic markers holds paramount importance. The exploration of the role of the KDELR3 kinase family in various neoplastic conditions constitutes an emerging area of research. However, the biological functions of KDELR3 and its prognostic implications in brain tumors remain largely undocumented. This study endeavored to ascertain the potential of KDELR3 as a prognostic indicator for glioma. We integrated a comprehensive dataset encompassing 1127 glioma samples, sourced from our cohort, The Cancer Genome Atlas (TCGA), and the Chinese Glioma Genome Atlas (CGGA), to delve into the expression patterns of KDELR3 in glioma and their associated implications. Notably, KDELR3 was markedly overexpressed in glioma and demonstrated a positive correlation with clinical progression. By utilizing Kaplan-Meier survival analysis and the Cox proportional hazards regression model, we evaluated the prognostic significance of KDELR3, revealing it as an independent predictor of adverse outcomes in glioma patients. Furthermore, gene set enrichment analysis unveiled potential signaling pathways associated with KDELR3 expression in glioma, primarily encompassing Cytokine-cytokine receptor interaction, extracellular matrix (ECM)-receptor interaction, and complement and coagulation cascades. In summation, our findings provide profound insights into the potential role of KDELR3 and its application as a novel and promising prognostic biomarker for glioma.

摘要

胶质瘤是成人中最常见的原发性颅内恶性肿瘤,其发病率和复发率都很高,对患者的生活质量和生存前景构成了相当大的威胁。因此,寻找有效的分子预后标志物至关重要。探索KDELR3激酶家族在各种肿瘤疾病中的作用是一个新兴的研究领域。然而,KDELR3的生物学功能及其在脑肿瘤中的预后意义在很大程度上仍未得到充分研究。本研究旨在确定KDELR3作为胶质瘤预后指标的潜力。我们整合了一个包含1127个胶质瘤样本的综合数据集,这些样本来自我们的队列、癌症基因组图谱(TCGA)和中国胶质瘤基因组图谱(CGGA),以深入研究KDELR3在胶质瘤中的表达模式及其相关影响。值得注意的是,KDELR3在胶质瘤中明显过表达,并与临床进展呈正相关。通过使用Kaplan-Meier生存分析和Cox比例风险回归模型,我们评估了KDELR3的预后意义,发现它是胶质瘤患者不良预后的独立预测因子。此外,基因集富集分析揭示了与胶质瘤中KDELR3表达相关的潜在信号通路,主要包括细胞因子-细胞因子受体相互作用、细胞外基质(ECM)-受体相互作用以及补体和凝血级联反应。总之,我们的研究结果为KDELR3的潜在作用及其作为一种新型且有前景的胶质瘤预后生物标志物的应用提供了深刻见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a16d/11681132/760a5332d1da/41598_2024_80991_Fig1_HTML.jpg

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