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一种与中性粒细胞胞外诱捕网相关的特征可预测卵巢癌的临床结局并识别其免疫格局。

A Neutrophil Extracellular Traps-Related Signature Predicts Clinical Outcomes and Identifies Immune Landscape in Ovarian Cancer.

作者信息

Zhang Yue, Wang Chao, Cheng Shanshan, Xu Yanna, Gu Sijia, Zhao Yaqian, Yang Jiani, Wang Yu

机构信息

Department of Gynecology, School of Medicine, Shanghai First Maternity and Infant Hospital, Tongji University, Shanghai, China.

Shanghai Key Laboratory of Maternal Fetal Medicine, School of Medicine, Shanghai First Maternity and Infant Hospital, Shanghai Institute of Maternal-Fetal Medicine and Gynecologic Oncology, Tongji University, Shanghai, China.

出版信息

J Cell Mol Med. 2024 Dec;28(24):e70302. doi: 10.1111/jcmm.70302.

Abstract

Ovarian cancer (OvCa) is the most lethal gynaecology malignancies worldwide. Neutrophil extracellular traps (NETs), net-like protein structures produced by activated neutrophils and DNA-histone complexes, have a central role in tumours, though haven't been fully explored in OvCa. We obtained transcriptome data from TCGA-OvCa database (n = 376) as training, ICGC-OvCa database (n = 111) as validation and GTEx database (n = 180) as controls. Through LASSO-COX Regression analysis, we identified an eight-gene signature among 87 NETs-related genes, which was significantly related to poor prognosis in both TCGA-OvCa and ICGC-OvCa cohorts (Log-rank p-value = 0.0003 and 0.0014). Next, we constructed and validated a prognostic nomogram, consist of NETs-related signature and clinical features (C-index = 0.82). We evaluated 22 typical immune cell infiltration through CIBERSORT analysis, which implied upregulation of memory CD4 + T cells, follicular helper T cells and neutrophils in high-risk group. Additionally, we predicted therapy sensitivity through TIDE algorithm, indicating that high NETs-riskscore exhibited more sensitivity towards Sorafenib and less sensitivity towards immunotherapy. We initially reported that RAC2 upregulation was associated with NETs formation and poor prognosis (p-value < 0.05) through IHC analysis of tissue microarrays (n = 125). Conclusively, NETs-related signature was reliable for OvCa prognosis prediction and therapy assessment. Especially, RAC2 was predominantly related to NETs formation, thus providing hints towards anti-tumour mechanism of NETs in OvCa.

摘要

卵巢癌(OvCa)是全球最致命的妇科恶性肿瘤。中性粒细胞胞外陷阱(NETs)是由活化的中性粒细胞产生的网状蛋白质结构和DNA-组蛋白复合物,在肿瘤中起核心作用,尽管在卵巢癌中尚未得到充分研究。我们从TCGA-OvCa数据库(n = 376)获取转录组数据作为训练集,从ICGC-OvCa数据库(n = 111)获取数据作为验证集,从GTEx数据库(n = 180)获取数据作为对照。通过LASSO-COX回归分析,我们在87个与NETs相关的基因中确定了一个八基因特征,该特征与TCGA-OvCa和ICGC-OvCa队列中的不良预后显著相关(对数秩p值 = 0.0003和0.0014)。接下来,我们构建并验证了一个预后列线图,其由NETs相关特征和临床特征组成(C指数 = 0.82)。我们通过CIBERSORT分析评估了22种典型免疫细胞浸润,这表明高危组中记忆性CD4 + T细胞、滤泡辅助性T细胞和中性粒细胞上调。此外,我们通过TIDE算法预测治疗敏感性,表明高NETs风险评分对索拉非尼表现出更高的敏感性,而对免疫治疗的敏感性较低。通过对组织微阵列(n = 125)的免疫组化分析,我们首次报道RAC2上调与NETs形成和不良预后相关(p值 < 0.05)。总之,NETs相关特征对于卵巢癌预后预测和治疗评估是可靠的。特别是,RAC2主要与NETs形成相关,从而为卵巢癌中NETs的抗肿瘤机制提供了线索。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/284e/11680186/6e3835120f06/JCMM-28-e70302-g007.jpg

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