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基于血液基因组突变特征的列线图模型的开发与验证,用于预测非小细胞肺癌脑转移风险

Development and validation of a nomogram model based on blood-based genomic mutation signature for predicting the risk of brain metastases in non-small cell lung cancer.

作者信息

Fang Jiabin, Chen Lina, Pan Shuyao, Li Qing, Liu Siqiang, Chen Sufang, Yang Xiaojie, Zhang Qiongyao, Chen Yusheng, Li Hongru

机构信息

Department of Infectious Diseases, Fujian Shengli Medical College, Fujian Medical University, Fuzhou University Affiliated Provincial Hospital, Fuzhou, China.

Department of Endocrinology, Fujian Shengli Medical College, Fujian Medical University, Fuzhou University Affiliated Provincial Hospital, Fuzhou, China.

出版信息

BMC Pulm Med. 2024 Dec 27;24(1):633. doi: 10.1186/s12890-024-03443-6.

Abstract

PURPOSE

Available research indicates that the mammalian target of rapamycin complex 1 (mTORC1) signaling pathway is significantly correlated with lung cancer brain metastasis (BM). This study established a clinical predictive model for assessing the risk of BM based on the mTORC1-related single nucleotide polymorphisms (SNPs).

METHODS

In this single-center retrospective study, 395 patients with non-small cell lung cancer were included. Clinical, pathological, imaging, and mTORC1-related single nucleotide polymorphism data were collected. Lasso regression was used to identify variables related to the risk of BM in lung cancer, and a nomogram was constructed. Internal validation was performed using 1,000 bootstrap samples. We plotted the receiver operating characteristic (ROC) curve and calculated the area under the curve (AUC). The calibration of the model was assessed using calibration curves and the Hosmer-Lemeshow goodness-of-fit test, and decision curve analysis (DCA) was plotted to evaluate the net clinical benefit.

RESULTS

The nomogram's predictive factors included lung cancer histology, clinical N stage, CEA, neutrophil to lymphocyte ratio (NLR), lymphocyte to monocyte ratio (LMR), RPTOR: rs1062935, and RPTOR: rs3751934. The AUC of the model in the training set and internal validation were 0.849 and 0.801, respectively. The calibration curves and Hosmer-Lemeshow test both indicated a good fit.

CONCLUSION

The nomogram has practicality and efficacy in predicting the high risk of BM in lung cancer patients, confirming that single nucleotide polymorphisms in the mTORC1 pathway genes may be good predictors in clinical prediction models.

摘要

目的

现有研究表明,雷帕霉素靶蛋白复合体1(mTORC1)信号通路与肺癌脑转移(BM)显著相关。本研究基于mTORC1相关单核苷酸多态性(SNP)建立了评估BM风险的临床预测模型。

方法

在这项单中心回顾性研究中,纳入了395例非小细胞肺癌患者。收集了临床、病理、影像学和mTORC1相关单核苷酸多态性数据。使用Lasso回归识别与肺癌BM风险相关的变量,并构建列线图。使用1000个自助抽样样本进行内部验证。绘制受试者操作特征(ROC)曲线并计算曲线下面积(AUC)。使用校准曲线和Hosmer-Lemeshow拟合优度检验评估模型的校准情况,并绘制决策曲线分析(DCA)以评估净临床获益。

结果

列线图的预测因素包括肺癌组织学类型、临床N分期、癌胚抗原(CEA)、中性粒细胞与淋巴细胞比值(NLR)、淋巴细胞与单核细胞比值(LMR)、RPTOR基因的rs1062935位点以及RPTOR基因的rs3751934位点。该模型在训练集和内部验证中的AUC分别为0.849和0.801。校准曲线和Hosmer-Lemeshow检验均表明拟合良好。

结论

该列线图在预测肺癌患者发生BM的高风险方面具有实用性和有效性,证实了mTORC1通路基因中的单核苷酸多态性可能是临床预测模型中的良好预测指标。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6fc/11681648/54da31747210/12890_2024_3443_Fig1_HTML.jpg

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