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年轻角膜与老年角膜中角膜内皮细胞的转录组比较。

Transcriptomic comparison of corneal endothelial cells in young versus old corneas.

作者信息

Hwang Jin Sun, Seo Je Hyun, Kim Hyeon Jung, Ryu Yunkyoung, Lee Young, Shin Young Joo

机构信息

Department of Ophthalmology, Hallym University College of Medicine, Hallym University Medical Center, 1 Shingil-ro, Youngdeungpo-gu, Seoul, 07441, Korea.

Hallym BioEyeTech Research Center, Hallym University College of Medicine, Seoul, Republic of Korea.

出版信息

Sci Rep. 2024 Dec 28;14(1):31110. doi: 10.1038/s41598-024-82423-6.

Abstract

Corneal endothelial cells, situated on the innermost layer of the cornea, are vital for maintaining its clarity and thickness by regulating fluid. In this study, we investigated the differences in the transcriptome between young and old corneal endothelial cells using next-generation sequencing (NGS). Cultured endothelial cells from both young and elderly donors were subjected to NGS to unravel the transcriptomic landscape. Subsequent analyses, facilitated by Metascape, allowed for the dissection of gene expression variances, unearthing pivotal biological pathways. A total of 568 genes showed differences, and were related to Endomembrane system organization, nuclear receptors meta pathway, efferocytosis, etc. Notably, a reduction in the expression of 260 genes was observed in the aged cells form old donors, and in the related analysis, eukaryotic translation initiation, integrator complex, and Hippo YAP signaling were significant. Conversely, 308 genes exhibited elevated expression levels in the elderly, correlating with processes including transition metal ion transport and glycoprotein biosynthesis. In conclusion, our investigation has revealed critical genes involved in the aging process of corneal endothelial cells and elucidated their underlying biological pathways. These insights are instrumental in selecting targets for therapeutic intervention, thereby facilitating the advancement of novel therapeutic approaches for the restoration and preservation of corneal endothelial cell function.

摘要

角膜内皮细胞位于角膜的最内层,通过调节液体对维持角膜的透明度和厚度至关重要。在本研究中,我们使用下一代测序(NGS)研究了年轻和老年角膜内皮细胞之间的转录组差异。对来自年轻和老年供体的培养内皮细胞进行NGS,以揭示转录组图谱。随后由Metascape辅助进行的分析,能够剖析基因表达差异,挖掘关键生物学途径。共有568个基因表现出差异,这些基因与内膜系统组织、核受体元途径、胞葬作用等有关。值得注意的是,在来自老年供体的老化细胞中观察到260个基因的表达减少,在相关分析中,真核生物翻译起始、整合子复合体和Hippo YAP信号传导具有显著性。相反,308个基因在老年人中表现出表达水平升高,与包括过渡金属离子转运和糖蛋白生物合成在内的过程相关。总之,我们的研究揭示了参与角膜内皮细胞衰老过程的关键基因,并阐明了其潜在的生物学途径。这些见解有助于选择治疗干预靶点,从而推动恢复和保存角膜内皮细胞功能的新型治疗方法的发展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f936/11682284/974c2feaeb39/41598_2024_82423_Fig1_HTML.jpg

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