Zhao Dandan, Zhuang Jinqiang, Wang Liping, Wu Lili, Xu Wangjie, Zhao Lu, Hong Jiang, Jin Wei, Miao Congliang
Department of Internal and Emergency Medicine, Shanghai General Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, People's Republic of China.
Department of Emergency Medicine, Affiliated Hospital of Xuzhou Medical University, Xuzhou, People's Republic of China.
J Inflamm Res. 2024 Dec 23;17:11451-11467. doi: 10.2147/JIR.S486763. eCollection 2024.
Septic cardiomyopathy (SCM) is a significant global public health concern characterized by substantial morbidity and mortality, which has not been improved for decades due to lack of early diagnosis and effective therapies. This study aimed to identify hub biomarkers in SCM and explore their potential mechanisms.
We utilized the GSE53007 and GSE207363 datasets for transcriptome analysis of normal and SCM mice. Hub biomarkers were identified through a protein-protein interaction (PPI) network and validated using LPS-treated C57/BL6 mice. Functional enrichment analysis was performed to uncover relevant signaling pathways, while single-cell RNA sequencing was used to examine key genes and regulatory mechanisms associated with SCM.
A total of 374 differentially expressed genes (DEGs) were identified, with 268 genes up-regulated and 106 genes down-regulated. Functional enrichment highlighted chemokine activity and receptor binding, with KEGG pathways revealing significant involvement of the TNF and IL-7 signaling pathways. Deterioration of cardiac function, elevated inflammatory markers such as IL-1β, IL-6, and increased cardiac injury biomarkers such as cTnI indicated the successful establishment of our SCM model. Subsequently, qPCR was conducted to validate the expression of the top 10 genes, through which we identified Cd40, Tlr2, Cxcl10, Ccl5, Cxcl1, Cd14, Gbp2, Ifit2, and Vegfa as key biomarkers. Single-cell sequencing indicated increased neutrophil and macrophage populations, with decreased B cells and cardiomyocytes. Additionally, transcription regulators Irf1 and Stat1 were found to potentially regulate the expression of Gbp2, Cxcl10, Ccl5, and Cd40, linking SCM to immune response, ferroptosis, pyroptosis, cuproptosis, and m6A RNA methylation modification.
This study identified nine hub biomarkers and two transcription regulators associated with SCM. Exploring the connections between SCM and immunity, ferroptosis, pyroptosis, cuproptosis, and m6A RNA methylation might provide insights into the underlying mechanisms. These findings enhanced our understanding of SCM's underlying mechanisms and might pave the way for novel therapeutic strategies to improve clinical outcomes.
脓毒症性心肌病(SCM)是一个重大的全球公共卫生问题,具有较高的发病率和死亡率,由于缺乏早期诊断和有效治疗方法,几十年来一直未得到改善。本研究旨在识别SCM中的关键生物标志物并探索其潜在机制。
我们利用GSE53007和GSE207363数据集对正常小鼠和SCM小鼠进行转录组分析。通过蛋白质-蛋白质相互作用(PPI)网络识别关键生物标志物,并使用脂多糖处理的C57/BL6小鼠进行验证。进行功能富集分析以揭示相关信号通路,同时使用单细胞RNA测序来检查与SCM相关的关键基因和调控机制。
共鉴定出374个差异表达基因(DEG),其中268个基因上调,106个基因下调。功能富集突出了趋化因子活性和受体结合,KEGG通路显示TNF和IL-7信号通路有显著参与。心脏功能恶化、炎症标志物如IL-1β、IL-6升高以及心脏损伤生物标志物如cTnI增加表明我们成功建立了SCM模型。随后,进行qPCR验证前10个基因的表达,通过此我们确定Cd40、Tlr2、Cxcl10 Ccl5、Cxcl1、Cd14、Gbp2、Ifit2和Vegfa为关键生物标志物。单细胞测序表明中性粒细胞和巨噬细胞群体增加,B细胞和心肌细胞减少。此外,发现转录调节因子Irf1和Stat1可能调节Gbp2、Cxcl10、Ccl5和Cd40的表达,将SCM与免疫反应、铁死亡、焦亡、铜死亡和m6A RNA甲基化修饰联系起来。
本研究识别出与SCM相关的9个关键生物标志物和2个转录调节因子。探索SCM与免疫、铁死亡、焦亡、铜死亡和m6A RNA甲基化之间的联系可能为潜在机制提供见解。这些发现加深了我们对SCM潜在机制的理解,并可能为改善临床结果的新治疗策略铺平道路。