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通过时间分辨连续晶体学解析光开关与G蛋白偶联受体的解离。

Photoswitch dissociation from a G protein-coupled receptor resolved by time-resolved serial crystallography.

作者信息

Glover Hannah, Saßmannshausen Torben, Bertrand Quentin, Trabuco Matilde, Slavov Chavdar, Bacchin Arianna, Andres Fabio, Kondo Yasushi, Stipp Robin, Wranik Maximilian, Khusainov Georgii, Carrillo Melissa, Kekilli Demet, Nan Jie, Gonzalez Ana, Cheng Robert, Neidhart Werner, Weinert Tobias, Leonarski Filip, Dworkowski Florian, Kepa Michal, Wachtveitl Josef, Hennig Michael, Standfuss Joerg

机构信息

PSI Center for Life Sciences, Villigen PSI, Switzerland.

Institute of Physical and Theoretical Chemistry, Goethe University, Frankfurt, Germany.

出版信息

Nat Commun. 2024 Dec 30;15(1):10837. doi: 10.1038/s41467-024-55109-w.

Abstract

G protein-coupled receptors (GPCRs) are the largest family of cell surface receptors in humans. The binding and dissociation of ligands tunes the inherent conformational flexibility of these important drug targets towards distinct functional states. Here we show how to trigger and resolve protein-ligand interaction dynamics within the human adenosine A receptor. For this, we designed seven photochemical affinity switches derived from the anti-Parkinson's drug istradefylline. In a rational approach based on UV/Vis spectroscopy, time-resolved absorption spectroscopy, differential scanning fluorimetry and cryo-crystallography, we identified compounds suitable for time-resolved serial crystallography. Our analysis of millisecond-scale dynamics revealed how trans-to-cis isomerization shifts selected istradefylline derivatives within the binding pocket. Depending on the chemical nature of the ligand, interactions between extracellular loops 2 and 3, acting as a lid on the binding pocket, are disrupted and rearrangement of the orthosteric binding pocket is invoked upon ligand dissociation. This innovative approach provides insights into GPCR dynamics at the atomic level, offering potential for developing novel pharmaceuticals.

摘要

G蛋白偶联受体(GPCRs)是人类细胞表面受体中最大的家族。配体的结合和解离调节这些重要药物靶点的固有构象灵活性,使其朝向不同的功能状态。在这里,我们展示了如何触发和解析人类腺苷A受体中的蛋白质-配体相互作用动力学。为此,我们设计了七种源自抗帕金森病药物异他林的光化学亲和开关。通过基于紫外/可见光谱、时间分辨吸收光谱、差示扫描荧光法和低温晶体学的合理方法,我们确定了适用于时间分辨串行晶体学的化合物。我们对毫秒级动力学的分析揭示了反式到顺式异构化如何在结合口袋内移动选定的异他林衍生物。根据配体的化学性质,作为结合口袋盖子的细胞外环2和3之间的相互作用被破坏,并且在配体解离时会引发正构结合口袋的重排。这种创新方法在原子水平上提供了对GPCR动力学的见解,为开发新型药物提供了潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/736f/11686364/99556364b4fc/41467_2024_55109_Fig1_HTML.jpg

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